Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sox9Q04887 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Sox9Q04887 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sox9Q04887 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Sox9Q04887 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Gm42598-201ENSMUST00000200110 2437 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sox9Q04887 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Mir582-201ENSMUST00000103758 81 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm12393-201ENSMUST00000117084 848 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm12040-201ENSMUST00000118357 537 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm15044-201ENSMUST00000120703 598 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm23513-201ENSMUST00000158181 133 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Ear-ps10-201ENSMUST00000161871 460 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm9006-201ENSMUST00000165520 841 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Gm27543-201ENSMUST00000183562 177 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm27158-201ENSMUST00000183813 238 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm18802-201ENSMUST00000186270 888 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm29111-201ENSMUST00000188823 696 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm28584-201ENSMUST00000191489 696 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm38138-201ENSMUST00000193274 696 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm19739-201ENSMUST00000195941 153 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sox9Q04887 Gm8264-201ENSMUST00000217801 465 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm18601-201ENSMUST00000220831 634 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Gm18940-201ENSMUST00000222518 871 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 AC105407.3-201ENSMUST00000224161 648 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Sox9Q04887 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sox9Q04887 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sox9Q04887 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sox9Q04887 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sox9Q04887 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sox9Q04887 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Sox9Q04887 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.17□□□□□ -1.42
Sox9Q04887 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox9Q04887 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sox9Q04887 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
Sox9Q04887 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Sox9Q04887 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Sox9Q04887 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sox9Q04887 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
Sox9Q04887 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox9Q04887 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Sox9Q04887 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Sox9Q04887 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Gm11212-201ENSMUST00000118337 618 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.16□□□□□ -1.42
Sox9Q04887 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.16□□□□□ -1.42
Sox9Q04887 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC6.16□□□□□ -1.42
Sox9Q04887 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Gm26991-201ENSMUST00000180950 620 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Gm21803-201ENSMUST00000188897 693 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms