Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC4.87□□□□□ -1.63
Scn1bP97952 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm23121-201ENSMUST00000157653 173 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm26487-201ENSMUST00000158022 94 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm24741-201ENSMUST00000158857 106 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Scn1bP97952 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm20620-201ENSMUST00000177528 168 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm18406-201ENSMUST00000185872 669 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC4.87□□□□□ -1.63
Scn1bP97952 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm1969-201ENSMUST00000198125 1220 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.87□□□□□ -1.63
Scn1bP97952 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.87□□□□□ -1.63
Scn1bP97952 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm18851-201ENSMUST00000210087 1058 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC4.87□□□□□ -1.63
Scn1bP97952 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC4.87□□□□□ -1.63
Scn1bP97952 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm6068-201ENSMUST00000222270 387 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm7042-201ENSMUST00000223027 384 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm36262-201ENSMUST00000223274 499 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.87□□□□□ -1.63
Scn1bP97952 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Diaph3-206ENSMUST00000226745 713 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Scn1bP97952 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Scn1bP97952 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Scn1bP97952 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
Scn1bP97952 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm18716-201ENSMUST00000204507 1603 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Scn1bP97952 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Scn1bP97952 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Scn1bP97952 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Scn1bP97952 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.86□□□□□ -1.63
Scn1bP97952 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm15772-201ENSMUST00000118533 438 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm11719-201ENSMUST00000119399 351 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm13484-201ENSMUST00000120738 412 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm12890-201ENSMUST00000120885 373 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC4.86□□□□□ -1.63
Scn1bP97952 Gm5924-201ENSMUST00000132554 871 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC4.86□□□□□ -1.63
Scn1bP97952 Gm25387-201ENSMUST00000157813 132 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Scn1bP97952 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Scn1bP97952 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Scn1bP97952 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Scn1bP97952 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm28974-201ENSMUST00000187893 231 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC4.86□□□□□ -1.63
Scn1bP97952 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC4.86□□□□□ -1.63
Scn1bP97952 Gm37177-201ENSMUST00000193768 417 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC4.86□□□□□ -1.63
Scn1bP97952 Gm37072-201ENSMUST00000194570 837 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm42579-201ENSMUST00000200512 734 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm19880-201ENSMUST00000207731 318 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.86□□□□□ -1.63
Scn1bP97952 Gm17999-201ENSMUST00000211568 542 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 AC153975.1-201ENSMUST00000220087 926 ntBASIC4.86□□□□□ -1.63
Scn1bP97952 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Scn1bP97952 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Scn1bP97952 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Scn1bP97952 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
Scn1bP97952 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms