Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
P20040 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC4.57□□□□□ -1.68
P20040 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC4.57□□□□□ -1.68
P20040 Gm13321-201ENSMUST00000117101 400 ntBASIC4.57□□□□□ -1.68
P20040 Gm10241-201ENSMUST00000117664 286 ntBASIC4.57□□□□□ -1.68
P20040 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC4.57□□□□□ -1.68
P20040 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.57□□□□□ -1.68
P20040 Gm15534-201ENSMUST00000137642 562 ntBASIC4.57□□□□□ -1.68
P20040 Mir3110-201ENSMUST00000175053 80 ntBASIC4.57□□□□□ -1.68
P20040 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
P20040 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
P20040 Mir7020-201ENSMUST00000183787 70 ntBASIC4.57□□□□□ -1.68
P20040 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
P20040 Gm29161-201ENSMUST00000188250 699 ntBASIC4.57□□□□□ -1.68
P20040 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.57□□□□□ -1.68
P20040 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.57□□□□□ -1.68
P20040 Gm44261-201ENSMUST00000203337 209 ntBASIC4.57□□□□□ -1.68
P20040 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC4.57□□□□□ -1.68
P20040 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC4.57□□□□□ -1.68
P20040 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.57□□□□□ -1.68
P20040 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.57□□□□□ -1.68
P20040 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4.57□□□□□ -1.68
P20040 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.57□□□□□ -1.68
P20040 Gm6474-201ENSMUST00000223250 699 ntBASIC4.57□□□□□ -1.68
P20040 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
P20040 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.57□□□□□ -1.68
P20040 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
P20040 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
P20040 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
P20040 Gm24525-201ENSMUST00000082917 151 ntBASIC4.57□□□□□ -1.68
P20040 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
P20040 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.57□□□□□ -1.68
P20040 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
P20040 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
P20040 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
P20040 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
P20040 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
P20040 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.56□□□□□ -1.68
P20040 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
P20040 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
P20040 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.56□□□□□ -1.68
P20040 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.56□□□□□ -1.68
P20040 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.56□□□□□ -1.68
P20040 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.56□□□□□ -1.68
P20040 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.56□□□□□ -1.68
P20040 Smc5-206ENSMUST00000226111 3265 ntBASIC4.56□□□□□ -1.68
P20040 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
P20040 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
P20040 Gm24541-201ENSMUST00000103871 96 ntBASIC4.56□□□□□ -1.68
P20040 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
P20040 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Gm14711-201ENSMUST00000117056 217 ntBASIC4.56□□□□□ -1.68
P20040 Gm8595-201ENSMUST00000118250 630 ntBASIC4.56□□□□□ -1.68
P20040 Gm15803-201ENSMUST00000120118 394 ntBASIC4.56□□□□□ -1.68
P20040 Gm11278-201ENSMUST00000121002 997 ntBASIC4.56□□□□□ -1.68
P20040 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.56□□□□□ -1.68
P20040 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.56□□□□□ -1.68
P20040 Gm24295-201ENSMUST00000158298 131 ntBASIC4.56□□□□□ -1.68
P20040 Gm22530-201ENSMUST00000158820 118 ntBASIC4.56□□□□□ -1.68
P20040 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Mir6971-201ENSMUST00000183497 63 ntBASIC4.56□□□□□ -1.68
P20040 Mir6374-201ENSMUST00000184003 107 ntBASIC4.56□□□□□ -1.68
P20040 Gm27541-201ENSMUST00000184078 122 ntBASIC4.56□□□□□ -1.68
P20040 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC4.56□□□□□ -1.68
P20040 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC4.56□□□□□ -1.68
P20040 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Gm37996-201ENSMUST00000191859 367 ntBASIC4.56□□□□□ -1.68
P20040 Gm37215-201ENSMUST00000194927 1259 ntBASIC4.56□□□□□ -1.68
P20040 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.56□□□□□ -1.68
P20040 Gm8861-201ENSMUST00000196346 832 ntBASIC4.56□□□□□ -1.68
P20040 Gm8874-201ENSMUST00000196826 286 ntBASIC4.56□□□□□ -1.68
P20040 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Gm33952-201ENSMUST00000197795 408 ntBASIC4.56□□□□□ -1.68
P20040 Gm44277-201ENSMUST00000205128 649 ntBASIC4.56□□□□□ -1.68
P20040 Gm7688-201ENSMUST00000212857 337 ntBASIC4.56□□□□□ -1.68
P20040 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.56□□□□□ -1.68
P20040 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.56□□□□□ -1.68
P20040 AC162467.1-201ENSMUST00000220254 621 ntBASIC4.56□□□□□ -1.68
P20040 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
P20040 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
P20040 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
P20040 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
P20040 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
P20040 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.56□□□□□ -1.68
P20040 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
P20040 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
P20040 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.56□□□□□ -1.68
P20040 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.56□□□□□ -1.68
P20040 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
P20040 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms