Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm29401-201ENSMUST00000186690 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm29178-204ENSMUST00000186784 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm28589-201ENSMUST00000186991 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm28936-201ENSMUST00000187153 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm29121-201ENSMUST00000187611 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm28243-201ENSMUST00000187801 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm28844-202ENSMUST00000187977 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm29058-201ENSMUST00000189510 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm29624-201ENSMUST00000190018 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm28780-201ENSMUST00000190223 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm28969-211ENSMUST00000190992 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm28990-207ENSMUST00000191219 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm36468-201ENSMUST00000192119 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm31572-201ENSMUST00000193341 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm30175-201ENSMUST00000194173 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm37659-201ENSMUST00000194574 111 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm30858-201ENSMUST00000195516 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.32□□□□□ -1.56
Lire1P11260 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm6009-201ENSMUST00000210848 280 ntBASIC5.32□□□□□ -1.56
Lire1P11260 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lire1P11260 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm24041-201ENSMUST00000083115 156 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm23686-201ENSMUST00000083241 164 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm23502-201ENSMUST00000083902 145 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lire1P11260 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Lire1P11260 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lire1P11260 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lire1P11260 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Gm12482-201ENSMUST00000120435 630 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Gm12308-201ENSMUST00000120440 389 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Gm13092-201ENSMUST00000136346 260 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lire1P11260 Gm22529-201ENSMUST00000158817 123 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.31□□□□□ -1.56
Lire1P11260 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lire1P11260 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lire1P11260 Samd15-201ENSMUST00000169669 1194 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Gm24081-201ENSMUST00000175177 125 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.31□□□□□ -1.56
Lire1P11260 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lire1P11260 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lire1P11260 Gm29159-201ENSMUST00000187969 379 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Gm28467-201ENSMUST00000190981 318 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.31□□□□□ -1.56
Lire1P11260 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Gm9480-201ENSMUST00000198038 616 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Gm18482-201ENSMUST00000202405 760 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.31□□□□□ -1.56
Lire1P11260 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Gm3785-201ENSMUST00000221000 202 ntBASIC5.31□□□□□ -1.56
Lire1P11260 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lire1P11260 Gm26072-201ENSMUST00000083135 107 ntBASIC5.31□□□□□ -1.56
Lire1P11260 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lire1P11260 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lire1P11260 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lire1P11260 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lire1P11260 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Lire1P11260 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.31□□□□□ -1.56
Lire1P11260 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms