Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm43405-201ENSMUST00000198642 337 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm45023-201ENSMUST00000207951 379 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Hoxd3P09027 AC124778.1-201ENSMUST00000216013 162 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.61□□□□□ -1.51
Hoxd3P09027 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Hoxd3P09027 AC126554.1-201ENSMUST00000222161 271 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 CT030182.4-201ENSMUST00000223647 645 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 AC163660.1-201ENSMUST00000223696 818 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 AC159002.2-201ENSMUST00000228843 4874 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm22749-201ENSMUST00000082490 107 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm24856-201ENSMUST00000082809 107 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm25258-201ENSMUST00000083049 107 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm24535-201ENSMUST00000083140 107 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm22352-201ENSMUST00000083917 107 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm10259-201ENSMUST00000091289 1590 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm37033-201ENSMUST00000193199 7350 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC5.6□□□□□ -1.51
Hoxd3P09027 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 AC107763.1-202ENSMUST00000225021 2663 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm11221-201ENSMUST00000117230 597 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm12635-201ENSMUST00000117285 752 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm12985-201ENSMUST00000118376 183 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm11903-201ENSMUST00000118958 727 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm12944-201ENSMUST00000119262 463 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm15177-201ENSMUST00000120491 577 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm11388-201ENSMUST00000120908 159 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm2735-201ENSMUST00000136133 277 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC5.6□□□□□ -1.51
Hoxd3P09027 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm20690-201ENSMUST00000177341 315 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm23018-201ENSMUST00000177928 109 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm17786-201ENSMUST00000182000 427 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Mir7084-201ENSMUST00000183876 70 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm29147-201ENSMUST00000186846 315 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm29201-201ENSMUST00000189120 431 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm28160-201ENSMUST00000191229 315 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm38373-201ENSMUST00000192042 288 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm37189-201ENSMUST00000192131 298 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm8101-201ENSMUST00000192796 478 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm18551-201ENSMUST00000195594 642 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm36985-201ENSMUST00000195595 379 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm43467-201ENSMUST00000197441 437 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm44475-201ENSMUST00000204041 424 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm44566-201ENSMUST00000207638 304 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm9652-201ENSMUST00000209345 163 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms