Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm37209-201ENSMUST00000194109 1276 ntBASIC6.03□□□□□ -1.44
Col4a1P02463 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC6.03□□□□□ -1.44
Col4a1P02463 Mecom-201ENSMUST00000061088 348 ntBASIC6.03□□□□□ -1.44
Col4a1P02463 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col4a1P02463 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.03□□□□□ -1.44
Col4a1P02463 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col4a1P02463 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col4a1P02463 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.03□□□□□ -1.44
Col4a1P02463 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Gm43426-201ENSMUST00000197287 2597 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Col4a1P02463 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Col4a1P02463 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Gm14610-201ENSMUST00000118358 966 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC6.02□□□□□ -1.45
Col4a1P02463 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Gm23318-201ENSMUST00000158000 108 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a1P02463 Mir3104-201ENSMUST00000174911 63 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 Gm22395-201ENSMUST00000177427 96 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 Mir6960-201ENSMUST00000183449 61 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 Mir3473f-201ENSMUST00000183743 136 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC6.02□□□□□ -1.45
Col4a1P02463 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Gm44648-201ENSMUST00000208267 329 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 Gm45857-201ENSMUST00000212207 356 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 AC098742.1-201ENSMUST00000227945 373 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a1P02463 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Gm23928-201ENSMUST00000082469 145 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a1P02463 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col4a1P02463 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Col4a1P02463 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a1P02463 Gm5746-201ENSMUST00000183550 2200 ntBASIC6.02□□□□□ -1.45
Col4a1P02463 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm14303-201ENSMUST00000121320 171 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Gm13808-201ENSMUST00000121353 184 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Gm24371-201ENSMUST00000122662 267 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm22211-201ENSMUST00000158097 156 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 Mir7074-201ENSMUST00000183884 63 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Gm27286-201ENSMUST00000184934 179 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Mir6933-201ENSMUST00000184982 81 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.01□□□□□ -1.45
Col4a1P02463 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.01□□□□□ -1.45
Col4a1P02463 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col4a1P02463 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm37890-201ENSMUST00000195610 3992 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Gm22488-201ENSMUST00000116811 127 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm23906-201ENSMUST00000157573 128 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC6.01□□□□□ -1.45
Col4a1P02463 Gm5734-201ENSMUST00000189787 913 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Gm8823-201ENSMUST00000193158 433 ntBASIC6.01□□□□□ -1.45
Col4a1P02463 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms