Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm25919-201ENSMUST00000104271 132 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm14125-202ENSMUST00000120921 756 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm25389-201ENSMUST00000157340 286 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm23965-201ENSMUST00000157969 142 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm22725-201ENSMUST00000158092 110 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Mir6343-201ENSMUST00000183584 84 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm28468-201ENSMUST00000188536 615 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm9442-201ENSMUST00000194242 319 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm32453-201ENSMUST00000204183 456 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm17992-201ENSMUST00000207346 1072 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 AC073947.1-201ENSMUST00000216991 649 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm20368-201ENSMUST00000220716 301 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Olfr151-202ENSMUST00000221099 929 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Mir188-201ENSMUST00000083464 68 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm42440-201ENSMUST00000197906 2284 ntBASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Upk3aQ9JKX8 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm38248-201ENSMUST00000193744 5783 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Mir292-201ENSMUST00000104847 82 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm13771-201ENSMUST00000117988 238 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm11550-201ENSMUST00000118210 699 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm15357-201ENSMUST00000119160 285 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm14603-201ENSMUST00000121275 448 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm26404-201ENSMUST00000158498 109 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Stk-ps2-204ENSMUST00000187808 616 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Mrgprb13-201ENSMUST00000188191 985 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Mrgpra14-201ENSMUST00000189782 913 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm43408-201ENSMUST00000198263 440 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm42983-201ENSMUST00000199879 815 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm18007-201ENSMUST00000205019 844 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm23514-201ENSMUST00000082827 130 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm23456-201ENSMUST00000083335 137 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upk3aQ9JKX8 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms