Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 AC125095.1-201ENSMUST00000228387 2020 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm15766-201ENSMUST00000118025 813 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm11774-201ENSMUST00000118601 293 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm14554-201ENSMUST00000119548 661 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm29513-201ENSMUST00000185741 202 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm20561-201ENSMUST00000188131 292 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm5734-201ENSMUST00000189787 913 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm18702-201ENSMUST00000196923 588 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm6543-201ENSMUST00000197353 808 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm9332-201ENSMUST00000198431 730 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm43794-201ENSMUST00000200971 692 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm17992-201ENSMUST00000207346 1072 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm18587-201ENSMUST00000213736 841 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 AC153870.1-201ENSMUST00000219599 560 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm17165-201ENSMUST00000096155 493 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps53Q8CCB4 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Mir706-201ENSMUST00000102262 84 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Snord65-201ENSMUST00000104269 72 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm6427-201ENSMUST00000118721 979 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm2199-201ENSMUST00000119065 874 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm7079-201ENSMUST00000119726 171 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm13440-201ENSMUST00000121665 496 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm12685-201ENSMUST00000121702 214 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm26000-201ENSMUST00000157991 107 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Mir6417-201ENSMUST00000183815 116 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm28429-201ENSMUST00000188521 363 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm28061-201ENSMUST00000189085 807 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm38201-201ENSMUST00000192143 387 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms