Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm37221-201ENSMUST00000194472 3007 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm24170-201ENSMUST00000104124 133 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm23178-201ENSMUST00000116782 95 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm15501-202ENSMUST00000140687 625 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm23069-201ENSMUST00000158240 311 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm23354-201ENSMUST00000158426 104 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm37961-201ENSMUST00000192729 299 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm44412-201ENSMUST00000203018 294 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm9512-201ENSMUST00000223112 497 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Mir20a-201ENSMUST00000083508 107 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Col6a6Q8C6K9 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.69
Col6a6Q8C6K9 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Col6a6Q8C6K9 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm11878-201ENSMUST00000117908 400 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm25962-201ENSMUST00000157173 168 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm38221-201ENSMUST00000195146 365 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm37137-201ENSMUST00000195138 2684 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm11790-201ENSMUST00000119569 455 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm27781-201ENSMUST00000185185 92 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 AC121804.1-201ENSMUST00000221016 394 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Gm45819-201ENSMUST00000210940 1751 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a6Q8C6K9 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm45179-201ENSMUST00000208452 4337 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm4852-201ENSMUST00000121202 729 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm23673-201ENSMUST00000157474 298 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm22804-201ENSMUST00000158052 101 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Scarna10-201ENSMUST00000158992 325 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm24166-201ENSMUST00000082724 135 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm43425-201ENSMUST00000201793 3291 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 AC121844.3-201ENSMUST00000219124 1785 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm12654-201ENSMUST00000120387 587 ntBASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a6Q8C6K9 Gm29036-201ENSMUST00000189967 877 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms