Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm10727-201ENSMUST00000197107 1602 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 AC112142.1-203ENSMUST00000228670 2472 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm26002-201ENSMUST00000101915 107 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm15075-201ENSMUST00000122187 477 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm22478-201ENSMUST00000122570 154 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm25459-201ENSMUST00000157953 114 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm25374-201ENSMUST00000158158 101 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Mir6411-201ENSMUST00000183556 108 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm29197-201ENSMUST00000185922 702 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm10193-201ENSMUST00000188288 231 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm3933-201ENSMUST00000195391 439 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm37095-201ENSMUST00000195421 205 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm19252-201ENSMUST00000204705 305 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Gm8291-201ENSMUST00000209635 1261 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 AC122858.1-202ENSMUST00000228290 986 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 CT573086.3-201ENSMUST00000228762 594 ntBASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim41Q5NCC3 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm20644-201ENSMUST00000176721 2063 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm45221-201ENSMUST00000207822 2272 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm23948-201ENSMUST00000104030 132 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm25346-201ENSMUST00000104509 128 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm13455-201ENSMUST00000118767 517 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm14805-201ENSMUST00000120172 340 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm22479-201ENSMUST00000122566 81 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Mir1960-201ENSMUST00000157488 78 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm26162-201ENSMUST00000157793 132 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm7335-201ENSMUST00000172475 373 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Mir6952-201ENSMUST00000185092 61 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm18781-201ENSMUST00000211252 924 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm7753-201ENSMUST00000221007 867 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 CT485612.3-201ENSMUST00000222179 408 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 AC144628.2-201ENSMUST00000227374 352 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 AC160120.1-201ENSMUST00000227446 663 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm23678-201ENSMUST00000083157 107 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm23461-201ENSMUST00000083265 107 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 AC140299.2-201ENSMUST00000219546 1969 ntBASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim41Q5NCC3 Gm18954-201ENSMUST00000222200 1792 ntBASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Gm24230-201ENSMUST00000104313 129 ntBASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Gm11408-201ENSMUST00000117889 519 ntBASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Gm9308-201ENSMUST00000119073 448 ntBASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Gm23259-201ENSMUST00000158318 303 ntBASIC11.49□□□□□ -0.57
Trim41Q5NCC3 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms