Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm26346-201ENSMUST00000157525 329 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm24860-201ENSMUST00000158457 276 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Scn1bP97952 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Scn1bP97952 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Scn1bP97952 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm25525-201ENSMUST00000177701 107 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm26178-201ENSMUST00000177706 107 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm24220-201ENSMUST00000177753 79 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm25988-201ENSMUST00000177759 79 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm23471-201ENSMUST00000177886 79 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm26488-201ENSMUST00000178225 79 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm26465-201ENSMUST00000178517 107 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm24317-201ENSMUST00000178536 107 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm25021-201ENSMUST00000179184 107 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm23449-201ENSMUST00000179208 79 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm22995-201ENSMUST00000179670 107 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm24424-201ENSMUST00000179714 107 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm24389-201ENSMUST00000179962 107 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm25221-201ENSMUST00000180051 79 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm25672-201ENSMUST00000180111 107 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm8941-201ENSMUST00000181451 899 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm29663-201ENSMUST00000186962 853 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm29163-201ENSMUST00000188029 107 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm43090-201ENSMUST00000202459 314 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm44261-201ENSMUST00000203337 209 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm44312-201ENSMUST00000203536 469 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.88□□□□□ -1.63
Scn1bP97952 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Scn1bP97952 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC4.88□□□□□ -1.63
Scn1bP97952 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm22807-201ENSMUST00000082737 129 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm23815-201ENSMUST00000083231 107 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm23520-201ENSMUST00000093736 107 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm45819-201ENSMUST00000210940 1751 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Scn1bP97952 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Scn1bP97952 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Scn1bP97952 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Scn1bP97952 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
Scn1bP97952 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scn1bP97952 Gm14783-201ENSMUST00000118900 663 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm11325-201ENSMUST00000119967 469 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm7931-201ENSMUST00000121537 271 ntBASIC4.87□□□□□ -1.63
Scn1bP97952 Gm25047-201ENSMUST00000122667 104 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms