Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm21122-201ENSMUST00000191548 3452 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm19136-201ENSMUST00000190706 2067 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PrkdcP97313 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm44209-201ENSMUST00000204556 4153 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm25572-201ENSMUST00000157527 172 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm24507-201ENSMUST00000157683 134 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm24314-201ENSMUST00000158274 123 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm27688-201ENSMUST00000183634 91 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm6546-201ENSMUST00000192096 766 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm44402-201ENSMUST00000203677 238 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC3.37□□□□□ -1.87
PrkdcP97313 Olfr1143-201ENSMUST00000090708 945 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm38062-201ENSMUST00000192541 1856 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC3.36□□□□□ -1.87
PrkdcP97313 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 AC147639.2-202ENSMUST00000224834 1545 ntBASIC3.36□□□□□ -1.87
PrkdcP97313 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PrkdcP97313 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Gm17121-201ENSMUST00000170414 847 ntBASIC3.36□□□□□ -1.87
PrkdcP97313 Gm17222-201ENSMUST00000180135 847 ntBASIC3.36□□□□□ -1.87
PrkdcP97313 Gm11394-201ENSMUST00000181421 517 ntBASIC3.36□□□□□ -1.87
PrkdcP97313 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Gm38011-201ENSMUST00000193312 279 ntBASIC3.36□□□□□ -1.87
PrkdcP97313 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.36□□□□□ -1.87
PrkdcP97313 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Gm12458-201ENSMUST00000119387 495 ntBASIC3.36□□□□□ -1.87
PrkdcP97313 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.36□□□□□ -1.87
PrkdcP97313 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC3.36□□□□□ -1.87
PrkdcP97313 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PrkdcP97313 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.36□□□□□ -1.87
PrkdcP97313 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC3.36□□□□□ -1.87
PrkdcP97313 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PrkdcP97313 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 AC164437.2-201ENSMUST00000228915 797 ntBASIC3.36□□□□□ -1.87
PrkdcP97313 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PrkdcP97313 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PrkdcP97313 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PrkdcP97313 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC3.36□□□□□ -1.87
PrkdcP97313 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PrkdcP97313 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm24235-201ENSMUST00000104319 129 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm18452-201ENSMUST00000202968 1111 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 163 ms