Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm9985-201ENSMUST00000044101 510 ntBASIC5.69□□□□□ -1.5
Sf3b6P59708 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sf3b6P59708 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.69□□□□□ -1.5
Sf3b6P59708 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sf3b6P59708 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sf3b6P59708 n-R5s79-201ENSMUST00000083071 120 ntBASIC5.69□□□□□ -1.5
Sf3b6P59708 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.69□□□□□ -1.5
Sf3b6P59708 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sf3b6P59708 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sf3b6P59708 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sf3b6P59708 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
Sf3b6P59708 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Sf3b6P59708 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sf3b6P59708 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Sf3b6P59708 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Sf3b6P59708 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Sf3b6P59708 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Sf3b6P59708 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sf3b6P59708 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sf3b6P59708 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Sf3b6P59708 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Sf3b6P59708 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sf3b6P59708 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sf3b6P59708 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.69□□□□□ -1.5
Sf3b6P59708 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sf3b6P59708 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sf3b6P59708 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sf3b6P59708 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sf3b6P59708 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm25396-201ENSMUST00000103981 133 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm25344-201ENSMUST00000104503 132 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm24519-201ENSMUST00000104507 132 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sf3b6P59708 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm14382-201ENSMUST00000117374 437 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm15766-201ENSMUST00000118025 813 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm11903-201ENSMUST00000118958 727 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm14901-201ENSMUST00000119001 283 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm12115-201ENSMUST00000119969 447 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm14353-201ENSMUST00000122200 869 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm6434-201ENSMUST00000163316 372 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm3084-201ENSMUST00000169967 598 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm9613-201ENSMUST00000171662 196 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm23568-201ENSMUST00000177960 92 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm22776-201ENSMUST00000178634 94 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm24829-201ENSMUST00000179245 92 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm23767-201ENSMUST00000179278 94 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm9556-201ENSMUST00000182938 940 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm17929-201ENSMUST00000186851 627 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm5252-201ENSMUST00000189030 909 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm37620-201ENSMUST00000192910 501 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm36998-201ENSMUST00000193205 704 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm37869-201ENSMUST00000193385 595 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Ighv1-30-201ENSMUST00000194082 349 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm43396-201ENSMUST00000197506 706 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm5055-201ENSMUST00000215697 581 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.68□□□□□ -1.5
Sf3b6P59708 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm7252-201ENSMUST00000223284 456 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sf3b6P59708 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sf3b6P59708 n-R5s169-201ENSMUST00000083110 120 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Mir412-201ENSMUST00000083636 80 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sf3b6P59708 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.68□□□□□ -1.5
Sf3b6P59708 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sf3b6P59708 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Sf3b6P59708 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms