Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox3P53784 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sox3P53784 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sox3P53784 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sox3P53784 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox3P53784 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
Sox3P53784 Gm14756-201ENSMUST00000116395 240 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox3P53784 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.02□□□□□ -1.61
Sox3P53784 Gm25278-201ENSMUST00000157267 120 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm24186-201ENSMUST00000157983 127 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm9294-201ENSMUST00000165198 789 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.02□□□□□ -1.61
Sox3P53784 Gm27551-201ENSMUST00000184258 77 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm28503-201ENSMUST00000185966 147 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.02□□□□□ -1.61
Sox3P53784 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.02□□□□□ -1.61
Sox3P53784 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.02□□□□□ -1.61
Sox3P53784 Gm19921-201ENSMUST00000210505 703 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm21041-201ENSMUST00000214829 823 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm18541-201ENSMUST00000215935 538 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.02□□□□□ -1.61
Sox3P53784 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.02□□□□□ -1.61
Sox3P53784 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.02□□□□□ -1.61
Sox3P53784 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sox3P53784 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Mir346-201ENSMUST00000083547 98 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Mir412-201ENSMUST00000083636 80 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Sox3P53784 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Sox3P53784 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox3P53784 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Sox3P53784 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.02□□□□□ -1.61
Sox3P53784 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox3P53784 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sox3P53784 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sox3P53784 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox3P53784 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox3P53784 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox3P53784 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.01□□□□□ -1.61
Sox3P53784 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Sox3P53784 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sox3P53784 Gm16082-201ENSMUST00000115992 377 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm13149-201ENSMUST00000122071 339 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm16254-201ENSMUST00000131528 730 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.01□□□□□ -1.61
Sox3P53784 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox3P53784 Gm23115-201ENSMUST00000158480 108 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm3170-201ENSMUST00000168753 850 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox3P53784 Gm3348-201ENSMUST00000177813 850 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm2914-201ENSMUST00000186120 328 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm8282-201ENSMUST00000187559 483 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm36994-201ENSMUST00000192941 492 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm37355-201ENSMUST00000193345 606 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm37336-202ENSMUST00000193705 468 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.01□□□□□ -1.61
Sox3P53784 Gm31306-201ENSMUST00000197517 508 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.01□□□□□ -1.61
Sox3P53784 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox3P53784 Gm44673-201ENSMUST00000205692 996 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm7990-201ENSMUST00000212126 593 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm29785-201ENSMUST00000217033 383 ntBASIC5.01□□□□□ -1.61
Sox3P53784 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox3P53784 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.01□□□□□ -1.61
Sox3P53784 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox3P53784 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox3P53784 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Sox3P53784 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox3P53784 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Sox3P53784 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Sox3P53784 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox3P53784 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox3P53784 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.01□□□□□ -1.61
Sox3P53784 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox3P53784 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.01□□□□□ -1.61
Sox3P53784 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5□□□□□ -1.61
Sox3P53784 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5□□□□□ -1.61
Sox3P53784 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5□□□□□ -1.61
Sox3P53784 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox3P53784 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Sox3P53784 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms