Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Gm27690-201ENSMUST00000184596 126 ntBASIC5.74□□□□□ -1.49
Col2a1P28481 Gm37243-201ENSMUST00000193407 595 ntBASIC5.74□□□□□ -1.49
Col2a1P28481 Gm8891-201ENSMUST00000198546 832 ntBASIC5.74□□□□□ -1.49
Col2a1P28481 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.74□□□□□ -1.49
Col2a1P28481 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.74□□□□□ -1.49
Col2a1P28481 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Col2a1P28481 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Col2a1P28481 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col2a1P28481 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.74□□□□□ -1.49
Col2a1P28481 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col2a1P28481 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col2a1P28481 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Col2a1P28481 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Col2a1P28481 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col2a1P28481 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col2a1P28481 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col2a1P28481 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.73□□□□□ -1.49
Col2a1P28481 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.73□□□□□ -1.49
Col2a1P28481 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.73□□□□□ -1.49
Col2a1P28481 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col2a1P28481 Gm23594-201ENSMUST00000104307 134 ntBASIC5.73□□□□□ -1.49
Col2a1P28481 Gm16106-201ENSMUST00000119187 294 ntBASIC5.73□□□□□ -1.49
Col2a1P28481 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 Gm6647-201ENSMUST00000170514 641 ntBASIC5.73□□□□□ -1.49
Col2a1P28481 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col2a1P28481 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.73□□□□□ -1.49
Col2a1P28481 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.73□□□□□ -1.49
Col2a1P28481 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.73□□□□□ -1.49
Col2a1P28481 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col2a1P28481 AC121986.1-201ENSMUST00000218588 781 ntBASIC5.73□□□□□ -1.49
Col2a1P28481 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 Gm5374-202ENSMUST00000222910 314 ntBASIC5.73□□□□□ -1.49
Col2a1P28481 AC134860.3-201ENSMUST00000223564 1300 ntBASIC5.73□□□□□ -1.49
Col2a1P28481 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Col2a1P28481 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.73□□□□□ -1.49
Col2a1P28481 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col2a1P28481 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Col2a1P28481 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col2a1P28481 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col2a1P28481 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col2a1P28481 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col2a1P28481 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col2a1P28481 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col2a1P28481 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col2a1P28481 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
Col2a1P28481 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Col2a1P28481 Gm24371-201ENSMUST00000122662 267 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col2a1P28481 Gm16259-201ENSMUST00000145241 553 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Gm26490-201ENSMUST00000157879 140 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Mir1947-201ENSMUST00000158235 85 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Gm26404-201ENSMUST00000158498 109 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col2a1P28481 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Gm5372-201ENSMUST00000187540 409 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Gm43350-201ENSMUST00000196382 711 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Gm45228-201ENSMUST00000206585 352 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Gm18255-201ENSMUST00000211316 765 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Gm24166-201ENSMUST00000082724 135 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col2a1P28481 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col2a1P28481 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Col2a1P28481 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col2a1P28481 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.72□□□□□ -1.49
Col2a1P28481 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.72□□□□□ -1.49
Col2a1P28481 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col2a1P28481 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Col2a1P28481 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.72□□□□□ -1.49
Col2a1P28481 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.71□□□□□ -1.49
Col2a1P28481 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col2a1P28481 Gm24931-201ENSMUST00000158324 107 ntBASIC5.71□□□□□ -1.49
Col2a1P28481 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Col2a1P28481 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col2a1P28481 Gm8614-201ENSMUST00000182528 978 ntBASIC5.71□□□□□ -1.49
Col2a1P28481 Gm19206-201ENSMUST00000186401 827 ntBASIC5.71□□□□□ -1.49
Col2a1P28481 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC5.71□□□□□ -1.49
Col2a1P28481 Gm44487-201ENSMUST00000205145 325 ntBASIC5.71□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms