Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm23692-201ENSMUST00000101881 160 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm25595-201ENSMUST00000102273 97 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm23274-201ENSMUST00000104056 130 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm7657-201ENSMUST00000118851 666 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm13121-201ENSMUST00000120637 632 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm22804-201ENSMUST00000158052 101 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm6632-201ENSMUST00000168425 954 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm20545-201ENSMUST00000174739 210 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Mir6343-201ENSMUST00000183584 84 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Mir7222-201ENSMUST00000183740 75 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Mir7020-201ENSMUST00000183787 70 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm44456-201ENSMUST00000196554 89 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm43717-201ENSMUST00000198684 310 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm44776-201ENSMUST00000207212 381 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.81□□□□□ -1.64
Cx3cl1O35188 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cx3cl1O35188 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm11984-201ENSMUST00000118142 766 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm15493-201ENSMUST00000119461 528 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm15022-201ENSMUST00000122074 746 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm7335-201ENSMUST00000172475 373 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm43712-201ENSMUST00000198020 291 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm45276-201ENSMUST00000209549 1086 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm272-201ENSMUST00000222073 919 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 AC132446.1-201ENSMUST00000222655 226 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm2645-201ENSMUST00000223516 547 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm4963-201ENSMUST00000072718 378 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm4822-201ENSMUST00000077551 479 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm23972-201ENSMUST00000083322 165 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cx3cl1O35188 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.8□□□□□ -1.64
Cx3cl1O35188 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Cx3cl1O35188 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms