Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Pcdh1F7BJK1 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.61□□□□□ -1.51
Pcdh1F7BJK1 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Pcdh1F7BJK1 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
Pcdh1F7BJK1 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Pcdh1F7BJK1 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Pcdh1F7BJK1 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.61□□□□□ -1.51
Pcdh1F7BJK1 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm10568-201ENSMUST00000193244 1634 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm45872-201ENSMUST00000209804 1584 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm44527-202ENSMUST00000204519 1314 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm25396-201ENSMUST00000103981 133 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm2178-201ENSMUST00000104927 357 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm12077-201ENSMUST00000117049 364 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm15901-201ENSMUST00000117663 941 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm8692-201ENSMUST00000118102 438 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm11920-201ENSMUST00000118491 563 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm11943-201ENSMUST00000119473 327 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm14238-201ENSMUST00000120227 323 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm5166-201ENSMUST00000121332 573 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm23883-201ENSMUST00000122686 290 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm22755-201ENSMUST00000157143 100 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm23553-201ENSMUST00000157817 295 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm26271-201ENSMUST00000158349 104 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm25617-201ENSMUST00000179548 133 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm27853-201ENSMUST00000184176 250 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm28191-201ENSMUST00000189112 211 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm8009-201ENSMUST00000191672 436 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm6074-201ENSMUST00000193340 451 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm43048-201ENSMUST00000196101 388 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm25617-202ENSMUST00000198387 132 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm43561-201ENSMUST00000199866 448 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm2314-201ENSMUST00000200391 586 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm7832-201ENSMUST00000202613 880 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm45226-201ENSMUST00000206602 288 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 AC159619.2-201ENSMUST00000222924 401 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 AC192334.2-201ENSMUST00000223087 1091 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 AC115735.5-201ENSMUST00000228386 397 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm15732-201ENSMUST00000079794 480 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 n-R5s95-201ENSMUST00000082684 118 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm14442-201ENSMUST00000119690 1736 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.6□□□□□ -1.51
Pcdh1F7BJK1 AC154323.3-201ENSMUST00000226927 1660 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms