Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm42830-201ENSMUST00000196642 313 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm7807-201ENSMUST00000212475 578 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm37137-201ENSMUST00000195138 2684 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm43363-201ENSMUST00000201590 2647 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm45171-201ENSMUST00000206360 736 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 CT025686.1-201ENSMUST00000227592 438 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Ube2nl-201ENSMUST00000085228 456 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm37254-201ENSMUST00000193542 3901 ntBASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm12850-201ENSMUST00000119210 436 ntBASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm22120-201ENSMUST00000175590 70 ntBASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm8919-201ENSMUST00000182028 1014 ntBASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Mir7685-201ENSMUST00000183555 62 ntBASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm28443-201ENSMUST00000189081 698 ntBASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm19617-201ENSMUST00000202977 308 ntBASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm7919-201ENSMUST00000202043 1389 ntBASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a3E9PWQ3 Gm24831-201ENSMUST00000116778 126 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm12252-201ENSMUST00000119517 219 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm14240-201ENSMUST00000120353 546 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm24507-201ENSMUST00000157683 134 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm29104-201ENSMUST00000186304 222 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm33973-201ENSMUST00000195148 534 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm19243-201ENSMUST00000198592 269 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm45727-201ENSMUST00000212886 572 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm44062-201ENSMUST00000203312 4857 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms