Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm24578-201ENSMUST00000103970 129 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm8145-201ENSMUST00000118220 745 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm12717-201ENSMUST00000118427 983 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm8214-201ENSMUST00000172123 351 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm9569-201ENSMUST00000187492 787 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.22□□□□□ -1.57
Scn1aA2APX8 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Scn1aA2APX8 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.21□□□□□ -1.57
Scn1aA2APX8 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.21□□□□□ -1.57
Scn1aA2APX8 Gm14082-201ENSMUST00000118582 801 ntBASIC5.21□□□□□ -1.57
Scn1aA2APX8 Gm4914-201ENSMUST00000119757 459 ntBASIC5.21□□□□□ -1.57
Scn1aA2APX8 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.21□□□□□ -1.57
Scn1aA2APX8 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Scn1aA2APX8 Gm25861-201ENSMUST00000158251 109 ntBASIC5.21□□□□□ -1.57
Scn1aA2APX8 Gm16107-201ENSMUST00000162523 862 ntBASIC5.21□□□□□ -1.57
Scn1aA2APX8 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.21□□□□□ -1.57
Scn1aA2APX8 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.21□□□□□ -1.57
Scn1aA2APX8 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.21□□□□□ -1.57
Scn1aA2APX8 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.21□□□□□ -1.57
Scn1aA2APX8 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Scn1aA2APX8 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Scn1aA2APX8 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Scn1aA2APX8 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.21□□□□□ -1.57
Scn1aA2APX8 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5.21□□□□□ -1.58
Scn1aA2APX8 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1aA2APX8 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.21□□□□□ -1.58
Scn1aA2APX8 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1aA2APX8 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.21□□□□□ -1.58
Scn1aA2APX8 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.21□□□□□ -1.58
Scn1aA2APX8 Gm9836-201ENSMUST00000117132 216 ntBASIC5.21□□□□□ -1.58
Scn1aA2APX8 Gm12073-201ENSMUST00000117382 524 ntBASIC5.21□□□□□ -1.58
Scn1aA2APX8 Gm16179-201ENSMUST00000120685 373 ntBASIC5.21□□□□□ -1.58
Scn1aA2APX8 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Gm44259-201ENSMUST00000204996 298 ntBASIC5.21□□□□□ -1.58
Scn1aA2APX8 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1aA2APX8 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.21□□□□□ -1.58
Scn1aA2APX8 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1aA2APX8 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.2□□□□□ -1.58
Scn1aA2APX8 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.2□□□□□ -1.58
Scn1aA2APX8 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Gm43113-201ENSMUST00000199713 1754 ntBASIC5.2□□□□□ -1.58
Scn1aA2APX8 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Gm12231-201ENSMUST00000119447 695 ntBASIC5.2□□□□□ -1.58
Scn1aA2APX8 Gm12893-201ENSMUST00000121732 275 ntBASIC5.2□□□□□ -1.58
Scn1aA2APX8 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Gm37700-201ENSMUST00000192617 965 ntBASIC5.2□□□□□ -1.58
Scn1aA2APX8 Gm4574-201ENSMUST00000207804 542 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms