Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Trim3Q9R1R2 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim3Q9R1R2 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.96□□□□□ -1.62
Trim3Q9R1R2 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim3Q9R1R2 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.96□□□□□ -1.62
Trim3Q9R1R2 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm11971-201ENSMUST00000117715 288 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm15531-201ENSMUST00000118062 252 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm13924-201ENSMUST00000119899 486 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm15428-201ENSMUST00000121352 333 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm25861-201ENSMUST00000158251 109 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm15812-201ENSMUST00000162331 748 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm19086-201ENSMUST00000190772 665 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm20239-201ENSMUST00000196610 982 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm43554-201ENSMUST00000199987 186 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Olfr878-201ENSMUST00000086061 1065 ntBASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim3Q9R1R2 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm13890-201ENSMUST00000117578 390 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm9429-201ENSMUST00000117804 868 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm11825-201ENSMUST00000120710 736 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm25906-201ENSMUST00000158489 126 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm2325-201ENSMUST00000186637 581 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm6137-201ENSMUST00000187552 578 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm18177-201ENSMUST00000188373 404 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm5066-201ENSMUST00000188479 822 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm272-201ENSMUST00000222073 919 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 AC102291.1-201ENSMUST00000227164 529 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Mir133b-201ENSMUST00000083546 119 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm25099-201ENSMUST00000093716 116 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms