Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 AW046200-203ENSMUST00000211787 2479 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm14837-201ENSMUST00000119688 206 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm15828-201ENSMUST00000119911 522 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Mir1960-201ENSMUST00000157488 78 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm24190-201ENSMUST00000157976 216 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm25898-201ENSMUST00000158303 106 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm25413-201ENSMUST00000158544 312 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm22646-201ENSMUST00000175130 115 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm25037-201ENSMUST00000175418 110 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm18396-201ENSMUST00000177095 361 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm36998-201ENSMUST00000193205 704 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm43743-202ENSMUST00000198353 491 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm43367-201ENSMUST00000199986 625 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm19761-201ENSMUST00000205372 391 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm17987-201ENSMUST00000206902 603 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm9373-201ENSMUST00000208724 599 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm45382-201ENSMUST00000210607 151 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 AL603630.1-201ENSMUST00000214781 147 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm8264-201ENSMUST00000217801 465 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm7045-201ENSMUST00000221466 605 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 AC140210.1-201ENSMUST00000224961 534 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm24032-201ENSMUST00000083932 159 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.8□□□□□ -1.48
Trim8Q99PJ2 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Gm14795-201ENSMUST00000118461 471 ntBASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Gm14115-201ENSMUST00000119242 482 ntBASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Gm15181-201ENSMUST00000120142 177 ntBASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Gm14331-201ENSMUST00000120396 409 ntBASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim8Q99PJ2 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms