Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm8623-201ENSMUST00000071573 436 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm42837-201ENSMUST00000197071 2829 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Eif4enif1-201ENSMUST00000020734 3565 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Supt7l-201ENSMUST00000065388 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gimap8-201ENSMUST00000078223 3160 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 AC154828.1-201ENSMUST00000220696 2810 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Plekha8-201ENSMUST00000101385 1838 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm16223-201ENSMUST00000087332 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 AC164625.1-201ENSMUST00000214034 3036 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Slc31a1-201ENSMUST00000084526 3718 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm25875-201ENSMUST00000104323 107 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm11699-201ENSMUST00000119016 401 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm22235-201ENSMUST00000157085 110 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm23094-201ENSMUST00000157551 322 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm25439-201ENSMUST00000158280 131 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm24131-201ENSMUST00000158539 107 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm18808-201ENSMUST00000173316 462 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim35Q8C006 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm37247-201ENSMUST00000192549 730 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm37701-201ENSMUST00000192947 1100 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm38306-201ENSMUST00000193954 237 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm37089-201ENSMUST00000195616 129 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm33778-201ENSMUST00000216884 704 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm9305-201ENSMUST00000220962 599 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 AC130829.2-201ENSMUST00000222931 127 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm46342-201ENSMUST00000223411 602 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 AC151982.1-201ENSMUST00000223546 464 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 AC123058.1-201ENSMUST00000223748 437 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 AC158983.1-201ENSMUST00000225691 221 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm5265-201ENSMUST00000076828 342 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm25207-201ENSMUST00000093745 107 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Trim35Q8C006 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim35Q8C006 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm37064-201ENSMUST00000193851 2231 ntBASIC8.29□□□□□ -1.08
Trim35Q8C006 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC8.29□□□□□ -1.08
Trim35Q8C006 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim35Q8C006 Gm9246-201ENSMUST00000117587 3490 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm44873-201ENSMUST00000208490 3428 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms