Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm9658-201ENSMUST00000182757 1012 ntBASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Mir7031-201ENSMUST00000183860 65 ntBASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm28412-201ENSMUST00000187243 177 ntBASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm18325-201ENSMUST00000203228 835 ntBASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim41Q5NCC3 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC11.54□□□□□ -0.56
Trim41Q5NCC3 AC159195.2-201ENSMUST00000223670 3757 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm37530-201ENSMUST00000191759 4932 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm336-201ENSMUST00000186376 1480 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm10936-201ENSMUST00000105264 252 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm12077-201ENSMUST00000117049 364 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm15399-201ENSMUST00000118055 724 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm13679-201ENSMUST00000118678 484 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm15621-201ENSMUST00000119162 364 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm13245-201ENSMUST00000119646 260 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm13493-201ENSMUST00000120318 493 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm15946-201ENSMUST00000160654 423 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm27820-201ENSMUST00000183628 175 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Mir8097-201ENSMUST00000185150 119 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm36998-201ENSMUST00000193205 704 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm9227-201ENSMUST00000194733 566 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm21006-201ENSMUST00000196930 667 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm42621-201ENSMUST00000198114 275 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm36448-201ENSMUST00000199916 438 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm44794-201ENSMUST00000206550 411 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm45448-201ENSMUST00000211739 209 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 AC123832.2-201ENSMUST00000215151 129 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 AC132954.1-201ENSMUST00000221017 342 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 AC161586.1-201ENSMUST00000223232 547 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm24763-201ENSMUST00000083688 190 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 AC140280.1-201ENSMUST00000227826 1847 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Gm42940-201ENSMUST00000200361 2362 ntBASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trim41Q5NCC3 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim41Q5NCC3 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trim41Q5NCC3 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim41Q5NCC3 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC11.52□□□□□ -0.56
Trim41Q5NCC3 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Mir467h-201ENSMUST00000116759 121 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm14038-201ENSMUST00000121500 807 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm12650-201ENSMUST00000121966 258 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm14237-201ENSMUST00000122080 430 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm25781-201ENSMUST00000122527 84 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm6900-201ENSMUST00000178971 342 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm7870-201ENSMUST00000184467 616 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm5322-201ENSMUST00000206142 699 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm44833-201ENSMUST00000208368 331 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 AC168059.1-201ENSMUST00000225846 841 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 AC144798.1-201ENSMUST00000228120 391 ntBASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim41Q5NCC3 AC174797.5-201ENSMUST00000225055 1860 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms