Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chrna5Q2MKA5 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.16□□□□□ -1.42
Chrna5Q2MKA5 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chrna5Q2MKA5 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm43784-201ENSMUST00000202922 2436 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm23193-201ENSMUST00000102427 82 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm11790-201ENSMUST00000119569 455 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm15828-201ENSMUST00000119911 522 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm13745-201ENSMUST00000121994 527 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm13366-201ENSMUST00000122198 970 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm6673-201ENSMUST00000166114 700 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm44370-201ENSMUST00000175436 112 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm21856-201ENSMUST00000187547 696 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm21735-201ENSMUST00000190360 696 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm37908-201ENSMUST00000195828 470 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm43309-201ENSMUST00000200837 458 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm10988-201ENSMUST00000209150 1088 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm9655-201ENSMUST00000211321 1284 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Nsa2-203ENSMUST00000225410 974 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 AC158388.1-201ENSMUST00000225441 256 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm22005-201ENSMUST00000082795 141 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Mir199a-2-201ENSMUST00000093618 110 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Gm37181-201ENSMUST00000192513 1727 ntBASIC6.15□□□□□ -1.42
Chrna5Q2MKA5 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Chrna5Q2MKA5 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Chrna5Q2MKA5 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.15□□□□□ -1.43
Chrna5Q2MKA5 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Chrna5Q2MKA5 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.15□□□□□ -1.43
Chrna5Q2MKA5 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Chrna5Q2MKA5 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Gm12190-201ENSMUST00000120001 187 ntBASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Gm14563-201ENSMUST00000120571 354 ntBASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Gm6647-201ENSMUST00000170514 641 ntBASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Gm20549-201ENSMUST00000174804 429 ntBASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Gm45236-201ENSMUST00000208632 229 ntBASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 AC142273.1-201ENSMUST00000213723 673 ntBASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 AC129597.1-201ENSMUST00000223046 1234 ntBASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 AC133910.1-201ENSMUST00000228128 624 ntBASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Gm18186-201ENSMUST00000192239 1580 ntBASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.14□□□□□ -1.43
Chrna5Q2MKA5 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Gm44668-201ENSMUST00000207911 3265 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Gm12931-201ENSMUST00000117046 324 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Gm5133-201ENSMUST00000118940 1255 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Mir6933-201ENSMUST00000184982 81 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Gm21654-201ENSMUST00000188086 691 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Gm29072-201ENSMUST00000191149 678 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Gm38185-201ENSMUST00000193195 694 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Gm6366-201ENSMUST00000198766 826 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Gm43894-201ENSMUST00000203274 688 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Gm19073-201ENSMUST00000219978 555 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 AC137117.1-201ENSMUST00000226912 441 ntBASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Chrna5Q2MKA5 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms