Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm13451-201ENSMUST00000117649 592 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm5073-201ENSMUST00000118222 820 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm12937-201ENSMUST00000118333 448 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm12873-201ENSMUST00000119988 422 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm11498-201ENSMUST00000120660 949 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Defa-ps13-201ENSMUST00000120695 204 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm12045-201ENSMUST00000122122 573 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm25979-201ENSMUST00000157177 138 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm26159-201ENSMUST00000158968 104 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm7346-201ENSMUST00000169661 476 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ebf1Q07802 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ebf1Q07802 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm11392-201ENSMUST00000181419 710 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm37404-201ENSMUST00000195726 359 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm43238-201ENSMUST00000196463 359 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm42818-201ENSMUST00000198869 987 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm43227-201ENSMUST00000202239 677 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm19617-201ENSMUST00000202977 308 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm43973-201ENSMUST00000203562 210 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm44225-201ENSMUST00000203582 186 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.19□□□□□ -1.42
Ebf1Q07802 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ebf1Q07802 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ebf1Q07802 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm8264-201ENSMUST00000217801 465 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 AC122034.1-201ENSMUST00000227641 595 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ebf1Q07802 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ebf1Q07802 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
Ebf1Q07802 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ebf1Q07802 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.19□□□□□ -1.42
Ebf1Q07802 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ebf1Q07802 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ebf1Q07802 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Ebf1Q07802 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ebf1Q07802 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ebf1Q07802 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ebf1Q07802 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.18□□□□□ -1.42
Ebf1Q07802 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.18□□□□□ -1.42
Ebf1Q07802 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Mir190b-201ENSMUST00000104803 80 ntBASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm12814-201ENSMUST00000117091 846 ntBASIC6.18□□□□□ -1.42
Ebf1Q07802 Snrpert-201ENSMUST00000121967 279 ntBASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm24517-201ENSMUST00000122560 107 ntBASIC6.18□□□□□ -1.42
Ebf1Q07802 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.18□□□□□ -1.42
Ebf1Q07802 Gm23050-201ENSMUST00000158775 165 ntBASIC6.18□□□□□ -1.42
Ebf1Q07802 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ebf1Q07802 Igkv17-134-201ENSMUST00000168310 348 ntBASIC6.18□□□□□ -1.42
Ebf1Q07802 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms