Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm43390-201ENSMUST00000196614 421 ntBASIC5.66□□□□□ -1.5
NcanP55066 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.66□□□□□ -1.5
NcanP55066 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.66□□□□□ -1.5
NcanP55066 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.66□□□□□ -1.5
NcanP55066 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.66□□□□□ -1.5
NcanP55066 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NcanP55066 Gm22456-201ENSMUST00000082578 125 ntBASIC5.66□□□□□ -1.5
NcanP55066 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.66□□□□□ -1.5
NcanP55066 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.66□□□□□ -1.5
NcanP55066 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NcanP55066 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NcanP55066 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
NcanP55066 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.65□□□□□ -1.5
NcanP55066 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NcanP55066 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
NcanP55066 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NcanP55066 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NcanP55066 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NcanP55066 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NcanP55066 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
NcanP55066 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.65□□□□□ -1.5
NcanP55066 Mir761-201ENSMUST00000103245 76 ntBASIC5.65□□□□□ -1.5
NcanP55066 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NcanP55066 Gm24608-201ENSMUST00000104381 136 ntBASIC5.65□□□□□ -1.5
NcanP55066 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC5.65□□□□□ -1.5
NcanP55066 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.65□□□□□ -1.5
NcanP55066 Gm11584-201ENSMUST00000120636 325 ntBASIC5.65□□□□□ -1.5
NcanP55066 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.65□□□□□ -1.5
NcanP55066 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.65□□□□□ -1.5
NcanP55066 Gm25962-201ENSMUST00000157173 168 ntBASIC5.65□□□□□ -1.5
NcanP55066 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NcanP55066 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.65□□□□□ -1.5
NcanP55066 Gm20519-201ENSMUST00000173684 359 ntBASIC5.65□□□□□ -1.5
NcanP55066 Gm20549-201ENSMUST00000174804 429 ntBASIC5.65□□□□□ -1.5
NcanP55066 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC5.65□□□□□ -1.5
NcanP55066 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
NcanP55066 Gm8614-201ENSMUST00000182528 978 ntBASIC5.65□□□□□ -1.5
NcanP55066 Gm4832-201ENSMUST00000182679 399 ntBASIC5.65□□□□□ -1.5
NcanP55066 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5.65□□□□□ -1.5
NcanP55066 Gm19739-201ENSMUST00000195941 153 ntBASIC5.65□□□□□ -1.5
NcanP55066 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.65□□□□□ -1.5
NcanP55066 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
NcanP55066 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.65□□□□□ -1.5
NcanP55066 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.65□□□□□ -1.5
NcanP55066 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.65□□□□□ -1.5
NcanP55066 Snora30-201ENSMUST00000083325 130 ntBASIC5.65□□□□□ -1.5
NcanP55066 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NcanP55066 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NcanP55066 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
NcanP55066 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
NcanP55066 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.65□□□□□ -1.51
NcanP55066 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NcanP55066 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
NcanP55066 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.65□□□□□ -1.51
NcanP55066 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
NcanP55066 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
NcanP55066 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
NcanP55066 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
NcanP55066 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.65□□□□□ -1.51
NcanP55066 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.65□□□□□ -1.51
NcanP55066 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.65□□□□□ -1.51
NcanP55066 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NcanP55066 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.64□□□□□ -1.51
NcanP55066 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.64□□□□□ -1.51
NcanP55066 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NcanP55066 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
NcanP55066 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.64□□□□□ -1.51
NcanP55066 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
NcanP55066 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Gm14756-201ENSMUST00000116395 240 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm16394-201ENSMUST00000117289 675 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm13733-201ENSMUST00000117290 535 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm7840-201ENSMUST00000122086 533 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm15840-201ENSMUST00000122099 943 ntBASIC5.64□□□□□ -1.51
NcanP55066 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms