Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm20940-201ENSMUST00000197308 360 ntBASIC5.76□□□□□ -1.49
Brca1P48754 Gm44138-201ENSMUST00000204939 271 ntBASIC5.76□□□□□ -1.49
Brca1P48754 Gm44237-201ENSMUST00000205183 936 ntBASIC5.76□□□□□ -1.49
Brca1P48754 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.76□□□□□ -1.49
Brca1P48754 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.76□□□□□ -1.49
Brca1P48754 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.76□□□□□ -1.49
Brca1P48754 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.76□□□□□ -1.49
Brca1P48754 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Brca1P48754 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Brca1P48754 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Brca1P48754 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Brca1P48754 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.75□□□□□ -1.49
Brca1P48754 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.75□□□□□ -1.49
Brca1P48754 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.75□□□□□ -1.49
Brca1P48754 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Brca1P48754 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Brca1P48754 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Brca1P48754 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.75□□□□□ -1.49
Brca1P48754 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.75□□□□□ -1.49
Brca1P48754 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Gm8993-201ENSMUST00000182182 983 ntBASIC5.75□□□□□ -1.49
Brca1P48754 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.75□□□□□ -1.49
Brca1P48754 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.75□□□□□ -1.49
Brca1P48754 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.75□□□□□ -1.49
Brca1P48754 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.75□□□□□ -1.49
Brca1P48754 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Brca1P48754 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Brca1P48754 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.75□□□□□ -1.49
Brca1P48754 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Brca1P48754 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Brca1P48754 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Gm13808-201ENSMUST00000121353 184 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Gm15075-201ENSMUST00000122187 477 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Gm22160-201ENSMUST00000158405 328 ntBASIC5.74□□□□□ -1.49
Brca1P48754 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
Brca1P48754 Gm37581-201ENSMUST00000192371 988 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Gm37167-201ENSMUST00000194946 396 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.74□□□□□ -1.49
Brca1P48754 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Brca1P48754 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Brca1P48754 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Brca1P48754 Gm38263-201ENSMUST00000195879 3059 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Brca1P48754 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.74□□□□□ -1.49
Brca1P48754 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Brca1P48754 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Brca1P48754 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Gm6884-201ENSMUST00000119318 615 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Gm23673-201ENSMUST00000157474 298 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Gm24363-201ENSMUST00000158440 311 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Gm20614-201ENSMUST00000177106 632 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Gm28615-201ENSMUST00000187527 482 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Gm18177-201ENSMUST00000188373 404 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.74□□□□□ -1.49
Brca1P48754 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.74□□□□□ -1.49
Brca1P48754 CT009765.2-201ENSMUST00000221331 392 ntBASIC5.74□□□□□ -1.49
Brca1P48754 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Mecom-201ENSMUST00000061088 348 ntBASIC5.74□□□□□ -1.49
Brca1P48754 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Brca1P48754 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.73□□□□□ -1.49
Brca1P48754 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.73□□□□□ -1.49
Brca1P48754 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.73□□□□□ -1.49
Brca1P48754 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Brca1P48754 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.73□□□□□ -1.49
Brca1P48754 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Brca1P48754 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Brca1P48754 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.73□□□□□ -1.49
Brca1P48754 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Brca1P48754 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms