Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc2P43407 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc2P43407 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc2P43407 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.51□□□□□ -1.53
Sdc2P43407 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Sdc2P43407 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Sdc2P43407 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sdc2P43407 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Sdc2P43407 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc2P43407 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.51□□□□□ -1.53
Sdc2P43407 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Sdc2P43407 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sdc2P43407 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Sdc2P43407 Gm25418-201ENSMUST00000104214 129 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.5□□□□□ -1.53
Sdc2P43407 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
Sdc2P43407 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Gm22343-201ENSMUST00000122648 286 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 Gm24395-201ENSMUST00000158139 125 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Gm25660-201ENSMUST00000158470 104 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sdc2P43407 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.5□□□□□ -1.53
Sdc2P43407 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Mir6416-201ENSMUST00000183664 117 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Gm2497-201ENSMUST00000189539 601 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Gm5842-201ENSMUST00000195073 622 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Gm43794-201ENSMUST00000200971 692 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Gm32453-201ENSMUST00000204183 456 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Gm18924-201ENSMUST00000211929 316 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.5□□□□□ -1.53
Sdc2P43407 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 Gm4822-201ENSMUST00000077551 479 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sdc2P43407 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sdc2P43407 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sdc2P43407 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Sdc2P43407 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.5□□□□□ -1.53
Sdc2P43407 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc2P43407 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc2P43407 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Sdc2P43407 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc2P43407 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sdc2P43407 Gm25758-201ENSMUST00000103987 129 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc2P43407 Gm14521-201ENSMUST00000119545 350 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Gm11790-201ENSMUST00000119569 455 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Gm22725-201ENSMUST00000158092 110 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Gm24931-201ENSMUST00000158324 107 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Gm22261-201ENSMUST00000158691 324 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc2P43407 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Sdc2P43407 Gm4831-201ENSMUST00000174626 594 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.49□□□□□ -1.53
Sdc2P43407 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.49□□□□□ -1.53
Sdc2P43407 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc2P43407 Gm28957-201ENSMUST00000190174 373 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Gm42652-201ENSMUST00000199073 614 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Sdc2P43407 Gm44776-201ENSMUST00000207212 381 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Sdc2P43407 Gm25134-201ENSMUST00000082646 160 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc2P43407 Gm10540-201ENSMUST00000097581 276 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.49□□□□□ -1.53
Sdc2P43407 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc2P43407 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc2P43407 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sdc2P43407 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc2P43407 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.49□□□□□ -1.53
Sdc2P43407 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sdc2P43407 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc2P43407 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc2P43407 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.48□□□□□ -1.53
Sdc2P43407 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.48□□□□□ -1.53
Sdc2P43407 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.48□□□□□ -1.53
Sdc2P43407 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc2P43407 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms