Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC7.25□□□□□ -1.25
Col18a1P39061 Gm42625-201ENSMUST00000198611 922 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm18452-201ENSMUST00000202968 1111 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC7.25□□□□□ -1.25
Col18a1P39061 AC113305.1-201ENSMUST00000214664 724 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col18a1P39061 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col18a1P39061 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col18a1P39061 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col18a1P39061 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Col18a1P39061 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Col18a1P39061 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Col18a1P39061 CT025604.1-201ENSMUST00000221111 3436 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col18a1P39061 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC7.25□□□□□ -1.25
Col18a1P39061 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col18a1P39061 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Col18a1P39061 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col18a1P39061 Gm42798-201ENSMUST00000200853 3972 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm14576-201ENSMUST00000118073 1111 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col18a1P39061 Gm15905-201ENSMUST00000137042 298 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm24444-201ENSMUST00000157244 308 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Mir6960-201ENSMUST00000183449 61 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Mir7222-201ENSMUST00000183740 75 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm27760-201ENSMUST00000185048 114 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC7.25□□□□□ -1.25
Col18a1P39061 Gm17952-201ENSMUST00000193914 747 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC7.25□□□□□ -1.25
Col18a1P39061 Gm43309-201ENSMUST00000200837 458 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm18205-201ENSMUST00000209215 841 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC7.25□□□□□ -1.25
Col18a1P39061 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC7.25□□□□□ -1.25
Col18a1P39061 CT025689.2-201ENSMUST00000224979 429 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col18a1P39061 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col18a1P39061 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC7.25□□□□□ -1.25
Col18a1P39061 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col18a1P39061 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col18a1P39061 Gm37630-201ENSMUST00000194210 1456 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col18a1P39061 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col18a1P39061 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col18a1P39061 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col18a1P39061 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col18a1P39061 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col18a1P39061 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.24□□□□□ -1.25
Col18a1P39061 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col18a1P39061 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col18a1P39061 Snord66-201ENSMUST00000104051 75 ntBASIC7.24□□□□□ -1.25
Col18a1P39061 Gm12026-201ENSMUST00000120961 1024 ntBASIC7.24□□□□□ -1.25
Col18a1P39061 Gm12007-201ENSMUST00000120978 597 ntBASIC7.24□□□□□ -1.25
Col18a1P39061 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col18a1P39061 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC7.24□□□□□ -1.25
Col18a1P39061 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col18a1P39061 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC7.24□□□□□ -1.25
Col18a1P39061 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC7.24□□□□□ -1.25
Col18a1P39061 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col18a1P39061 Gm43478-201ENSMUST00000200381 292 ntBASIC7.24□□□□□ -1.25
Col18a1P39061 Gm44984-201ENSMUST00000207802 394 ntBASIC7.24□□□□□ -1.25
Col18a1P39061 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col18a1P39061 Gm22456-201ENSMUST00000082578 125 ntBASIC7.24□□□□□ -1.25
Col18a1P39061 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col18a1P39061 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col18a1P39061 Gm42755-201ENSMUST00000198533 1493 ntBASIC7.24□□□□□ -1.25
Col18a1P39061 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col18a1P39061 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col18a1P39061 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col18a1P39061 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col18a1P39061 Gm44424-201ENSMUST00000203438 1826 ntBASIC7.24□□□□□ -1.25
Col18a1P39061 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC7.24□□□□□ -1.25
Col18a1P39061 Gm14857-201ENSMUST00000117862 3185 ntBASIC7.23□□□□□ -1.25
Col18a1P39061 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col18a1P39061 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Col18a1P39061 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Col18a1P39061 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC7.23□□□□□ -1.25
Col18a1P39061 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col18a1P39061 Snord70-201ENSMUST00000104157 87 ntBASIC7.23□□□□□ -1.25
Col18a1P39061 Gm14624-201ENSMUST00000117746 192 ntBASIC7.23□□□□□ -1.25
Col18a1P39061 Gm11420-201ENSMUST00000120047 402 ntBASIC7.23□□□□□ -1.25
Col18a1P39061 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC7.23□□□□□ -1.25
Col18a1P39061 Gm25103-201ENSMUST00000122671 318 ntBASIC7.23□□□□□ -1.25
Col18a1P39061 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col18a1P39061 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col18a1P39061 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC7.23□□□□□ -1.25
Col18a1P39061 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC7.23□□□□□ -1.25
Col18a1P39061 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC7.23□□□□□ -1.25
Col18a1P39061 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Col18a1P39061 Gm45209-201ENSMUST00000207122 353 ntBASIC7.23□□□□□ -1.25
Col18a1P39061 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC7.23□□□□□ -1.25
Col18a1P39061 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC7.23□□□□□ -1.25
Col18a1P39061 AC154851.1-201ENSMUST00000221591 655 ntBASIC7.23□□□□□ -1.25
Col18a1P39061 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col18a1P39061 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms