Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25439-201ENSMUST00000158280 131 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm23762-201ENSMUST00000158348 106 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Mir6987-201ENSMUST00000184789 73 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Sdc1P18828 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm38166-201ENSMUST00000191660 471 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm18717-201ENSMUST00000192744 1241 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm18445-201ENSMUST00000195502 774 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm1969-201ENSMUST00000198125 1220 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Clec2j-202ENSMUST00000203658 606 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm19900-201ENSMUST00000207285 576 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm7499-201ENSMUST00000210423 813 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm45525-201ENSMUST00000210800 389 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm19936-201ENSMUST00000216414 838 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 AC151904.5-201ENSMUST00000218975 549 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 AC151904.3-201ENSMUST00000219266 895 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm9267-201ENSMUST00000222831 404 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Gm36262-201ENSMUST00000223274 499 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 AC105324.1-201ENSMUST00000227844 386 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm7117-201ENSMUST00000071515 387 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Sdc1P18828 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Sdc1P18828 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.16□□□□□ -1.74
Sdc1P18828 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Sdc1P18828 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Sdc1P18828 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.15□□□□□ -1.74
Sdc1P18828 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.15□□□□□ -1.74
Sdc1P18828 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Sdc1P18828 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Sdc1P18828 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
Sdc1P18828 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.74
Sdc1P18828 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Sdc1P18828 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.15□□□□□ -1.74
Sdc1P18828 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Sdc1P18828 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm24541-201ENSMUST00000103871 96 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm11105-201ENSMUST00000112781 478 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm16149-201ENSMUST00000117631 309 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm16044-201ENSMUST00000118475 450 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm14046-201ENSMUST00000119389 509 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm13367-201ENSMUST00000119955 796 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm12535-201ENSMUST00000121025 484 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm24664-201ENSMUST00000158939 100 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm21772-201ENSMUST00000169213 478 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm17126-201ENSMUST00000172276 523 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm28923-201ENSMUST00000187755 322 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm38150-201ENSMUST00000192996 452 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm43304-201ENSMUST00000196803 326 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm43276-201ENSMUST00000199712 364 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm3148-201ENSMUST00000203594 612 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm44603-201ENSMUST00000206820 367 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.15□□□□□ -1.75
Sdc1P18828 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC4.15□□□□□ -1.75
Sdc1P18828 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC4.15□□□□□ -1.75
Sdc1P18828 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms