Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm37530-201ENSMUST00000191759 4932 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm6893-201ENSMUST00000118385 522 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm12053-201ENSMUST00000119022 252 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm11403-201ENSMUST00000122195 369 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm22940-201ENSMUST00000158560 155 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm22262-201ENSMUST00000158713 86 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm17121-201ENSMUST00000170414 847 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm25939-201ENSMUST00000179876 191 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm8305-201ENSMUST00000180022 1195 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm17222-201ENSMUST00000180135 847 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm24306-201ENSMUST00000180229 79 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm7952-201ENSMUST00000180540 984 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm27684-201ENSMUST00000183778 80 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm9504-201ENSMUST00000196322 468 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm18593-201ENSMUST00000200754 1139 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Hoxd3P09027 AC135292.2-201ENSMUST00000227559 367 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm4963-201ENSMUST00000072718 378 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 n-R5s29-201ENSMUST00000082836 119 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm26206-201ENSMUST00000082908 110 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm25579-201ENSMUST00000083407 106 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxd3P09027 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC5.63□□□□□ -1.51
Hoxd3P09027 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxd3P09027 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm21152-201ENSMUST00000190271 3483 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm42771-201ENSMUST00000198342 2486 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm14904-201ENSMUST00000117067 335 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm13866-201ENSMUST00000118901 968 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms