Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Mir20a-201ENSMUST00000083508 107 ntBASIC4.84□□□□□ -1.63
Cx3cl1O35188 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cx3cl1O35188 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cx3cl1O35188 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cx3cl1O35188 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Cx3cl1O35188 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Cx3cl1O35188 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Cx3cl1O35188 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Cx3cl1O35188 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
Cx3cl1O35188 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Mir1188-201ENSMUST00000116756 120 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm5699-201ENSMUST00000152491 723 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm25865-201ENSMUST00000158247 104 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm23354-201ENSMUST00000158426 104 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm22326-201ENSMUST00000158897 351 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm24949-201ENSMUST00000183609 215 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm18698-201ENSMUST00000192327 668 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm5285-201ENSMUST00000193089 666 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm18007-201ENSMUST00000205019 844 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Zfp429-203ENSMUST00000224684 524 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 AC163631.1-201ENSMUST00000225041 598 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm24706-201ENSMUST00000082806 137 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.83□□□□□ -1.64
Cx3cl1O35188 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cx3cl1O35188 Gm42658-201ENSMUST00000197199 1575 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm11970-201ENSMUST00000116105 320 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm11912-201ENSMUST00000117235 264 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm16394-201ENSMUST00000117289 675 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm11212-201ENSMUST00000118337 618 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm14520-201ENSMUST00000119258 387 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm15791-201ENSMUST00000120365 319 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm12007-201ENSMUST00000120978 597 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm25846-201ENSMUST00000158013 135 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm24175-201ENSMUST00000158931 129 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm16112-201ENSMUST00000159075 382 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm10048-201ENSMUST00000194196 372 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm18036-201ENSMUST00000195256 272 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm44307-201ENSMUST00000204466 764 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm45660-201ENSMUST00000210267 151 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm3912-203ENSMUST00000211024 367 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cx3cl1O35188 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.82□□□□□ -1.64
Cx3cl1O35188 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Cx3cl1O35188 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms