Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 AC122769.3-201ENSMUST00000227739 3245 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm43900-201ENSMUST00000204868 2669 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Mir190b-201ENSMUST00000104803 80 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm15094-201ENSMUST00000118394 1131 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm24444-201ENSMUST00000157244 308 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm6541-201ENSMUST00000165542 561 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm24561-201ENSMUST00000175182 95 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Mir6417-201ENSMUST00000183815 116 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm27964-201ENSMUST00000185195 62 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm8039-201ENSMUST00000204758 712 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm8999-201ENSMUST00000204951 969 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm45034-201ENSMUST00000206831 482 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 AC118733.1-201ENSMUST00000217387 1217 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm19181-201ENSMUST00000218891 940 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 AC158981.3-202ENSMUST00000228906 523 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.34□□□□□ -1.23
NpcdF8VQB8 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NpcdF8VQB8 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
NpcdF8VQB8 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
NpcdF8VQB8 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NpcdF8VQB8 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
NpcdF8VQB8 Thap6-201ENSMUST00000191860 3151 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.33□□□□□ -1.24
NpcdF8VQB8 AC174459.1-201ENSMUST00000224476 1943 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
NpcdF8VQB8 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm22273-201ENSMUST00000104040 132 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm13818-201ENSMUST00000119441 511 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm15193-201ENSMUST00000120224 865 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm15335-201ENSMUST00000122442 411 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC7.33□□□□□ -1.24
NpcdF8VQB8 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm18128-201ENSMUST00000172625 511 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Mir6367-201ENSMUST00000183385 102 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm27522-201ENSMUST00000183949 230 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm37054-201ENSMUST00000193481 543 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm44456-201ENSMUST00000196554 89 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm9332-201ENSMUST00000198431 730 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm43384-201ENSMUST00000200569 637 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm43228-201ENSMUST00000200735 264 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NpcdF8VQB8 CU024910.1-201ENSMUST00000214310 418 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm34005-201ENSMUST00000215834 282 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC7.33□□□□□ -1.24
NpcdF8VQB8 AC163743.1-201ENSMUST00000224309 270 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 AC122858.1-201ENSMUST00000226212 433 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 AC122858.3-201ENSMUST00000226341 740 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 AC124408.2-201ENSMUST00000228168 645 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NpcdF8VQB8 AC133283.1-201ENSMUST00000228443 859 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NpcdF8VQB8 n-R5s215-201ENSMUST00000082480 104 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm23975-201ENSMUST00000082685 106 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 n-R5s69-201ENSMUST00000083872 119 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm10540-201ENSMUST00000097581 276 ntBASIC7.33□□□□□ -1.24
NpcdF8VQB8 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
NpcdF8VQB8 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms