Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm23273-201ENSMUST00000104058 135 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm14753-201ENSMUST00000118503 246 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm12007-201ENSMUST00000120978 597 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm5699-201ENSMUST00000152491 723 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm6632-201ENSMUST00000168425 954 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm22569-201ENSMUST00000175545 124 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm27564-201ENSMUST00000185196 96 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm44984-201ENSMUST00000207802 394 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 AC102603.1-201ENSMUST00000227481 584 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Gm44901-201ENSMUST00000208157 3977 ntBASIC4.27□□□□□ -1.73
Col6a4A2AX52 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a4A2AX52 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm18508-201ENSMUST00000215790 1642 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a4A2AX52 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm23014-201ENSMUST00000104144 130 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm14610-201ENSMUST00000118358 966 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm12026-201ENSMUST00000120961 1024 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm12094-201ENSMUST00000121781 472 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm21909-201ENSMUST00000178260 439 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm27568-201ENSMUST00000184220 99 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm29072-201ENSMUST00000191149 678 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm6070-201ENSMUST00000207275 419 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm44584-201ENSMUST00000208395 2880 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Snord66-201ENSMUST00000104051 75 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm13232-201ENSMUST00000121816 632 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a4A2AX52 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Col6a4A2AX52 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm28957-201ENSMUST00000190174 373 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm32308-201ENSMUST00000203053 280 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Gm18329-201ENSMUST00000215832 589 ntBASIC4.26□□□□□ -1.73
Col6a4A2AX52 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a4A2AX52 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Gm18757-201ENSMUST00000207938 3141 ntBASIC4.25□□□□□ -1.73
Col6a4A2AX52 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 AC107232.1-201ENSMUST00000227785 1503 ntBASIC4.25□□□□□ -1.73
Col6a4A2AX52 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Gm12281-201ENSMUST00000119536 298 ntBASIC4.25□□□□□ -1.73
Col6a4A2AX52 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Gm15796-201ENSMUST00000162135 204 ntBASIC4.25□□□□□ -1.73
Col6a4A2AX52 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Gm9442-201ENSMUST00000194242 319 ntBASIC4.25□□□□□ -1.73
Col6a4A2AX52 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 AC158511.1-201ENSMUST00000223622 764 ntBASIC4.25□□□□□ -1.73
Col6a4A2AX52 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.25□□□□□ -1.73
Col6a4A2AX52 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col6a4A2AX52 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms