Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Mir199b-201ENSMUST00000175066 110 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm5261-201ENSMUST00000185860 713 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm17929-201ENSMUST00000186851 627 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm28404-201ENSMUST00000190242 453 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm29369-201ENSMUST00000190674 615 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm24826-202ENSMUST00000197298 216 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm8041-201ENSMUST00000199755 616 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm43026-201ENSMUST00000202972 325 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm3148-201ENSMUST00000203594 612 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm19116-201ENSMUST00000218592 642 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim39Q9ESN2 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm25757-201ENSMUST00000103986 123 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm12740-201ENSMUST00000118794 308 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm14867-201ENSMUST00000120156 866 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm15538-201ENSMUST00000121410 313 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm11263-201ENSMUST00000121853 749 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm13409-201ENSMUST00000122072 546 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm20549-201ENSMUST00000174804 429 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm9457-201ENSMUST00000180176 372 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm26528-201ENSMUST00000181965 283 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm27617-201ENSMUST00000184321 168 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm28151-201ENSMUST00000189404 951 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm37313-201ENSMUST00000191673 290 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm42580-201ENSMUST00000197223 753 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm8539-201ENSMUST00000199822 501 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm43631-201ENSMUST00000202011 369 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm18127-201ENSMUST00000208479 725 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 Gm7751-201ENSMUST00000212868 709 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim39Q9ESN2 AC174776.1-201ENSMUST00000221509 405 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 AC174776.2-201ENSMUST00000222561 405 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 AC133598.2-201ENSMUST00000224302 624 ntBASIC6.32□□□□□ -1.4
Trim39Q9ESN2 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms