Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm13738-201ENSMUST00000122437 469 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm26490-201ENSMUST00000157879 140 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm6632-201ENSMUST00000168425 954 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Mir3097-201ENSMUST00000175356 67 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm27960-201ENSMUST00000183445 184 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm27528-201ENSMUST00000183544 205 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Mir6539-201ENSMUST00000183732 110 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm27409-201ENSMUST00000184727 80 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm37682-201ENSMUST00000191776 522 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm22897-202ENSMUST00000197782 127 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 AC122035.2-201ENSMUST00000228698 462 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm28322-201ENSMUST00000185627 1475 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm23746-201ENSMUST00000104229 125 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm15490-201ENSMUST00000119894 387 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm12768-201ENSMUST00000120055 759 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm25176-201ENSMUST00000122640 125 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm23121-201ENSMUST00000157653 173 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm27818-201ENSMUST00000184536 159 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm28660-201ENSMUST00000186496 253 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm37215-201ENSMUST00000194927 1259 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm29755-201ENSMUST00000196976 948 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm38670-201ENSMUST00000199248 77 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm18997-201ENSMUST00000216353 822 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Mir338-201ENSMUST00000083666 98 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.98□□□□□ -1.61
Lima1Q9ERG0 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm13321-201ENSMUST00000117101 400 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm12039-201ENSMUST00000118219 180 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm14587-201ENSMUST00000121714 658 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm26086-201ENSMUST00000157902 263 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm21959-201ENSMUST00000178439 452 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm18828-202ENSMUST00000181035 310 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms