Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm13400-201ENSMUST00000117436 380 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm12677-201ENSMUST00000118668 426 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm13593-201ENSMUST00000121329 692 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm24438-201ENSMUST00000157893 115 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm23352-201ENSMUST00000158428 64 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm25445-201ENSMUST00000158996 299 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm6673-201ENSMUST00000166114 700 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Mir3572-201ENSMUST00000175549 86 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm28094-201ENSMUST00000185262 390 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm18752-201ENSMUST00000192876 608 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm20926-201ENSMUST00000194457 696 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm43007-201ENSMUST00000197618 291 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm43105-201ENSMUST00000202987 459 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm8125-201ENSMUST00000216602 738 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 AC152951.1-201ENSMUST00000218907 266 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm6171-201ENSMUST00000220760 645 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm23516-201ENSMUST00000093728 107 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm13100-201ENSMUST00000117157 1439 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm12193-201ENSMUST00000117250 379 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm7834-201ENSMUST00000117560 437 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm13603-201ENSMUST00000119404 83 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Amd-ps1-201ENSMUST00000120127 994 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm7931-201ENSMUST00000121537 271 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm15237-201ENSMUST00000122104 469 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm13738-201ENSMUST00000122437 469 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Ear-ps7-201ENSMUST00000161287 442 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm23632-201ENSMUST00000175289 125 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm18969-201ENSMUST00000189423 730 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm44726-201ENSMUST00000203427 217 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm44225-201ENSMUST00000203582 186 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm8774-201ENSMUST00000203621 692 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm45192-201ENSMUST00000206749 283 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm44982-201ENSMUST00000208795 471 ntBASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC6.03□□□□□ -1.44
Nkx6-1Q99MA9 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms