Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm16164-201ENSMUST00000160078 468 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm21959-201ENSMUST00000178439 452 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm28885-201ENSMUST00000185615 563 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm28597-201ENSMUST00000187664 666 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm7266-201ENSMUST00000187999 405 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm29545-201ENSMUST00000188878 694 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm6693-201ENSMUST00000189583 813 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm37265-201ENSMUST00000191698 885 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm29778-201ENSMUST00000201667 466 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm6261-201ENSMUST00000204707 760 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm29920-201ENSMUST00000206876 754 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm6906-201ENSMUST00000218014 569 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm18628-201ENSMUST00000220584 475 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm24207-201ENSMUST00000082781 108 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm24921-201ENSMUST00000083024 107 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm24454-201ENSMUST00000083349 132 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Olfr467-201ENSMUST00000084756 927 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm10221-201ENSMUST00000088299 309 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ndc1Q8VCB1 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm23440-201ENSMUST00000104299 130 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm15108-201ENSMUST00000116160 803 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm12230-201ENSMUST00000118301 454 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm11913-201ENSMUST00000119094 336 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm13818-201ENSMUST00000119441 511 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm14294-201ENSMUST00000119749 751 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm13751-201ENSMUST00000120280 752 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm12006-201ENSMUST00000120786 403 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm11260-201ENSMUST00000121163 942 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm15379-201ENSMUST00000121224 648 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm15111-201ENSMUST00000122142 878 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm23212-201ENSMUST00000122718 60 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm16557-201ENSMUST00000159182 191 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm17177-201ENSMUST00000169144 483 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm11392-201ENSMUST00000181419 710 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm27460-201ENSMUST00000184213 100 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm27538-201ENSMUST00000185065 294 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm20940-201ENSMUST00000197308 360 ntBASIC5.79□□□□□ -1.48
Ndc1Q8VCB1 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms