Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Mir6417-201ENSMUST00000183815 116 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Gm37030-201ENSMUST00000194254 295 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 n-TStga1-201ENSMUST00000199903 109 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Gm4321-201ENSMUST00000200520 442 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Gm3148-201ENSMUST00000203594 612 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Gm44091-201ENSMUST00000205212 649 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Gm6477-201ENSMUST00000217098 764 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC4.97□□□□□ -1.61
Lsm1Q8VC85 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC4.97□□□□□ -1.61
Lsm1Q8VC85 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Gm19095-201ENSMUST00000220533 730 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.97□□□□□ -1.61
Lsm1Q8VC85 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lsm1Q8VC85 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Lsm1Q8VC85 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Lsm1Q8VC85 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.96□□□□□ -1.61
Lsm1Q8VC85 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Lsm1Q8VC85 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Lsm1Q8VC85 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm6134-201ENSMUST00000117265 171 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm11313-201ENSMUST00000118779 432 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm11584-201ENSMUST00000120636 325 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm19206-201ENSMUST00000186401 827 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm37215-201ENSMUST00000194927 1259 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm8039-201ENSMUST00000204758 712 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm45908-201ENSMUST00000212977 1177 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm2645-201ENSMUST00000223516 547 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 AV026068-231ENSMUST00000225862 482 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm7205-201ENSMUST00000196032 1323 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.96□□□□□ -1.62
Lsm1Q8VC85 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm11486-201ENSMUST00000107322 478 ntBASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm12422-201ENSMUST00000121431 302 ntBASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm22596-201ENSMUST00000157601 316 ntBASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm24664-201ENSMUST00000158939 100 ntBASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm6808-201ENSMUST00000162341 807 ntBASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Mir7082-201ENSMUST00000183526 92 ntBASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Ighv1-44-201ENSMUST00000195597 352 ntBASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm42753-201ENSMUST00000196718 1268 ntBASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm34149-201ENSMUST00000203547 304 ntBASIC4.95□□□□□ -1.62
Lsm1Q8VC85 Gm45269-201ENSMUST00000210359 282 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 124.8 ms