Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 AC117608.2-201ENSMUST00000224124 1363 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Snord66-201ENSMUST00000104051 75 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm7363-201ENSMUST00000119883 399 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm14908-201ENSMUST00000120930 1286 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm20673-201ENSMUST00000177167 430 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm37846-201ENSMUST00000191840 3774 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm38062-201ENSMUST00000192541 1856 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm37914-201ENSMUST00000195317 2679 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm9239-201ENSMUST00000186942 2557 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm11278-201ENSMUST00000121002 997 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm13232-201ENSMUST00000121816 632 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm15905-201ENSMUST00000137042 298 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm29489-201ENSMUST00000188934 324 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm5842-201ENSMUST00000195073 622 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm45651-201ENSMUST00000210857 335 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 AC161252.2-201ENSMUST00000224978 374 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 AC154527.3-201ENSMUST00000225519 989 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm37717-201ENSMUST00000192647 3027 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm45635-201ENSMUST00000211516 2134 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm25419-201ENSMUST00000104215 191 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm15206-201ENSMUST00000119143 454 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm15357-201ENSMUST00000119160 285 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm14046-201ENSMUST00000119389 509 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm19898-201ENSMUST00000177490 251 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm5285-201ENSMUST00000193089 666 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm38011-201ENSMUST00000193312 279 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 AC132384.6-201ENSMUST00000218976 1206 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm5045-201ENSMUST00000027054 810 ntBASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a6Q8C6K9 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm42549-201ENSMUST00000202392 7004 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm12423-201ENSMUST00000118334 135 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm6062-201ENSMUST00000120462 631 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm13214-201ENSMUST00000122137 408 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm25292-201ENSMUST00000122797 322 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm28615-201ENSMUST00000187527 482 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm5734-201ENSMUST00000189787 913 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms