Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm12067-201ENSMUST00000119755 1148 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm14070-201ENSMUST00000120773 428 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm23954-201ENSMUST00000157213 353 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 Mir5128-201ENSMUST00000175217 84 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm20690-201ENSMUST00000177341 315 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm18802-201ENSMUST00000186270 888 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm28779-201ENSMUST00000189678 323 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm4332-201ENSMUST00000196114 346 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm43954-201ENSMUST00000204634 544 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 AC155709.1-201ENSMUST00000218794 162 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 AC108947.1-201ENSMUST00000224274 1000 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 AC151730.1-201ENSMUST00000226106 448 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm22977-201ENSMUST00000082615 107 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm14415-201ENSMUST00000118260 1578 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.71□□□□□ -1.5
Sf3b6P59708 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sf3b6P59708 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sf3b6P59708 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm13349-201ENSMUST00000118436 411 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm14358-201ENSMUST00000118458 403 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm12016-201ENSMUST00000119079 681 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm13444-201ENSMUST00000119445 522 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm13735-201ENSMUST00000120217 670 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm16100-201ENSMUST00000120489 231 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm22076-201ENSMUST00000158601 84 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm24680-201ENSMUST00000158759 126 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm18522-201ENSMUST00000173947 650 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm18953-201ENSMUST00000175694 300 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm9529-201ENSMUST00000177598 579 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Gm25874-201ENSMUST00000178030 79 ntBASIC5.7□□□□□ -1.5
Sf3b6P59708 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sf3b6P59708 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Sf3b6P59708 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Sf3b6P59708 Mir6238-201ENSMUST00000184140 129 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms