Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NcanP55066 Gm15400-201ENSMUST00000118944 601 ntBASIC5.68□□□□□ -1.5
NcanP55066 Gm13690-201ENSMUST00000118989 285 ntBASIC5.68□□□□□ -1.5
NcanP55066 Gm12422-201ENSMUST00000121431 302 ntBASIC5.68□□□□□ -1.5
NcanP55066 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.68□□□□□ -1.5
NcanP55066 Gm23781-201ENSMUST00000157940 308 ntBASIC5.68□□□□□ -1.5
NcanP55066 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NcanP55066 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NcanP55066 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NcanP55066 Gm29036-201ENSMUST00000189967 877 ntBASIC5.68□□□□□ -1.5
NcanP55066 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.68□□□□□ -1.5
NcanP55066 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NcanP55066 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.68□□□□□ -1.5
NcanP55066 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NcanP55066 Gm23928-201ENSMUST00000082469 145 ntBASIC5.68□□□□□ -1.5
NcanP55066 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NcanP55066 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NcanP55066 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NcanP55066 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NcanP55066 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
NcanP55066 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NcanP55066 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.68□□□□□ -1.5
NcanP55066 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NcanP55066 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
NcanP55066 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NcanP55066 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NcanP55066 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.67□□□□□ -1.5
NcanP55066 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NcanP55066 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NcanP55066 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NcanP55066 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NcanP55066 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NcanP55066 Gm25420-201ENSMUST00000104216 127 ntBASIC5.67□□□□□ -1.5
NcanP55066 Gm10936-201ENSMUST00000105264 252 ntBASIC5.67□□□□□ -1.5
NcanP55066 Gm8145-201ENSMUST00000118220 745 ntBASIC5.67□□□□□ -1.5
NcanP55066 Gm15772-201ENSMUST00000118533 438 ntBASIC5.67□□□□□ -1.5
NcanP55066 Gm15603-201ENSMUST00000119252 492 ntBASIC5.67□□□□□ -1.5
NcanP55066 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.67□□□□□ -1.5
NcanP55066 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NcanP55066 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NcanP55066 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NcanP55066 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NcanP55066 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NcanP55066 Gm28097-201ENSMUST00000187333 366 ntBASIC5.67□□□□□ -1.5
NcanP55066 Gm29474-201ENSMUST00000187688 379 ntBASIC5.67□□□□□ -1.5
NcanP55066 Gm19214-201ENSMUST00000191956 1083 ntBASIC5.67□□□□□ -1.5
NcanP55066 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
NcanP55066 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.67□□□□□ -1.5
NcanP55066 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.67□□□□□ -1.5
NcanP55066 Gm26330-201ENSMUST00000082817 104 ntBASIC5.67□□□□□ -1.5
NcanP55066 Gm24919-201ENSMUST00000083020 106 ntBASIC5.67□□□□□ -1.5
NcanP55066 Snord22-201ENSMUST00000083153 126 ntBASIC5.67□□□□□ -1.5
NcanP55066 Gm24763-201ENSMUST00000083688 190 ntBASIC5.67□□□□□ -1.5
NcanP55066 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.67□□□□□ -1.5
NcanP55066 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
NcanP55066 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NcanP55066 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.67□□□□□ -1.5
NcanP55066 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NcanP55066 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NcanP55066 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NcanP55066 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.67□□□□□ -1.5
NcanP55066 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Gm42975-201ENSMUST00000200612 1491 ntBASIC5.66□□□□□ -1.5
NcanP55066 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Gm14725-201ENSMUST00000120324 828 ntBASIC5.66□□□□□ -1.5
NcanP55066 Gm17014-201ENSMUST00000120765 168 ntBASIC5.66□□□□□ -1.5
NcanP55066 Gm13973-201ENSMUST00000121371 894 ntBASIC5.66□□□□□ -1.5
NcanP55066 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
NcanP55066 Gm24113-201ENSMUST00000157477 276 ntBASIC5.66□□□□□ -1.5
NcanP55066 Gm23905-201ENSMUST00000157568 109 ntBASIC5.66□□□□□ -1.5
NcanP55066 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NcanP55066 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NcanP55066 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NcanP55066 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm29072-201ENSMUST00000191149 678 ntBASIC5.66□□□□□ -1.5
NcanP55066 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.66□□□□□ -1.5
NcanP55066 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms