Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Traf1P39428 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Traf1P39428 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Traf1P39428 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Traf1P39428 Gm5946-201ENSMUST00000182340 970 ntBASIC6.23□□□□□ -1.41
Traf1P39428 Gm42452-201ENSMUST00000199749 617 ntBASIC6.23□□□□□ -1.41
Traf1P39428 Gm44330-201ENSMUST00000200106 143 ntBASIC6.23□□□□□ -1.41
Traf1P39428 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Traf1P39428 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC6.23□□□□□ -1.41
Traf1P39428 AC147615.1-201ENSMUST00000218914 441 ntBASIC6.23□□□□□ -1.41
Traf1P39428 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.23□□□□□ -1.41
Traf1P39428 Gm3213-201ENSMUST00000219296 441 ntBASIC6.23□□□□□ -1.41
Traf1P39428 Gm32526-201ENSMUST00000221878 981 ntBASIC6.23□□□□□ -1.41
Traf1P39428 CT030182.2-201ENSMUST00000223569 620 ntBASIC6.23□□□□□ -1.41
Traf1P39428 AC165953.1-201ENSMUST00000226386 357 ntBASIC6.23□□□□□ -1.41
Traf1P39428 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Traf1P39428 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Traf1P39428 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Traf1P39428 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Traf1P39428 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Traf1P39428 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Traf1P39428 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Traf1P39428 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Traf1P39428 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.23□□□□□ -1.41
Traf1P39428 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Traf1P39428 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Traf1P39428 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.23□□□□□ -1.41
Traf1P39428 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Traf1P39428 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Traf1P39428 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.22□□□□□ -1.41
Traf1P39428 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Traf1P39428 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Traf1P39428 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Traf1P39428 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Traf1P39428 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Traf1P39428 Gm11278-201ENSMUST00000121002 997 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Traf1P39428 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Traf1P39428 Gm15534-201ENSMUST00000137642 562 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Gm22885-201ENSMUST00000157410 107 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Scarna13-201ENSMUST00000158164 275 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Gm22261-201ENSMUST00000158691 324 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Gm6872-201ENSMUST00000165001 700 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Traf1P39428 Gm23806-201ENSMUST00000175157 109 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Gm4617-201ENSMUST00000178993 331 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Mir7006-201ENSMUST00000183624 69 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.22□□□□□ -1.41
Traf1P39428 Gm37720-201ENSMUST00000195497 1241 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Traf1P39428 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Traf1P39428 Gm44134-202ENSMUST00000204777 545 ntBASIC6.22□□□□□ -1.41
Traf1P39428 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Traf1P39428 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Traf1P39428 AC154851.2-201ENSMUST00000222172 644 ntBASIC6.22□□□□□ -1.41
Traf1P39428 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.22□□□□□ -1.41
Traf1P39428 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.22□□□□□ -1.41
Traf1P39428 CT030194.2-201ENSMUST00000225752 379 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Traf1P39428 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Traf1P39428 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Traf1P39428 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Traf1P39428 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Traf1P39428 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.22□□□□□ -1.41
Traf1P39428 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Traf1P39428 Gm13928-201ENSMUST00000120326 1732 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.22□□□□□ -1.41
Traf1P39428 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.21□□□□□ -1.41
Traf1P39428 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC6.21□□□□□ -1.41
Traf1P39428 Gm44535-201ENSMUST00000208889 3136 ntBASIC6.21□□□□□ -1.41
Traf1P39428 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Traf1P39428 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.21□□□□□ -1.41
Traf1P39428 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Traf1P39428 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Traf1P39428 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Traf1P39428 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Traf1P39428 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
Traf1P39428 Gm12641-201ENSMUST00000117874 985 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Gm25293-201ENSMUST00000122792 285 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Traf1P39428 Gm23897-201ENSMUST00000158110 158 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Gm24860-201ENSMUST00000158457 276 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Gm15838-201ENSMUST00000161575 180 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Gm8358-201ENSMUST00000167222 555 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Mrgprb13-201ENSMUST00000188191 985 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Gm8480-201ENSMUST00000190350 698 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Traf1P39428 Gm43444-201ENSMUST00000198123 291 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Gm6362-201ENSMUST00000217686 836 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
Traf1P39428 Gm8137-201ENSMUST00000218997 463 ntBASIC6.21□□□□□ -1.42
Traf1P39428 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC6.21□□□□□ -1.42
Traf1P39428 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Traf1P39428 Olfr1153-201ENSMUST00000052300 957 ntBASIC6.21□□□□□ -1.42
Traf1P39428 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Traf1P39428 Gm25187-201ENSMUST00000083906 133 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms