Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm25774-201ENSMUST00000116717 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm22102-201ENSMUST00000116730 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm23177-201ENSMUST00000116784 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm24193-201ENSMUST00000116801 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm24744-201ENSMUST00000116833 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm24427-201ENSMUST00000116896 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm22346-201ENSMUST00000116918 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm23606-201ENSMUST00000116938 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm22029-201ENSMUST00000116940 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm26298-201ENSMUST00000116956 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm23844-201ENSMUST00000116959 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm24484-201ENSMUST00000117009 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm25347-201ENSMUST00000117026 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm22112-201ENSMUST00000117032 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Col18a1P39061 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col18a1P39061 Gm26085-201ENSMUST00000157900 116 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm23046-201ENSMUST00000158369 284 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col18a1P39061 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Col18a1P39061 Gm22991-201ENSMUST00000178126 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm25754-201ENSMUST00000178653 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm22419-201ENSMUST00000178780 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm24802-201ENSMUST00000178897 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm25208-201ENSMUST00000178964 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm24567-201ENSMUST00000179294 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm23943-201ENSMUST00000179712 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm25228-201ENSMUST00000180121 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm23304-201ENSMUST00000180209 121 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC7.27□□□□□ -1.25
Col18a1P39061 Gm28097-201ENSMUST00000187333 366 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm21856-201ENSMUST00000187547 696 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC7.27□□□□□ -1.25
Col18a1P39061 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC7.27□□□□□ -1.25
Col18a1P39061 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm18303-201ENSMUST00000190055 1176 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm43954-201ENSMUST00000204634 544 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm6261-201ENSMUST00000204707 760 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC7.27□□□□□ -1.25
Col18a1P39061 AC124542.1-201ENSMUST00000205588 908 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC7.27□□□□□ -1.25
Col18a1P39061 AC159242.1-201ENSMUST00000225832 194 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC7.27□□□□□ -1.25
Col18a1P39061 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Col18a1P39061 AC151734.1-201ENSMUST00000227023 1740 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col18a1P39061 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col18a1P39061 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
Col18a1P39061 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Col18a1P39061 AC154630.1-201ENSMUST00000215334 2440 ntBASIC7.27□□□□□ -1.25
Col18a1P39061 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Col18a1P39061 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col18a1P39061 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col18a1P39061 Gm38362-201ENSMUST00000192999 2064 ntBASIC7.26□□□□□ -1.25
Col18a1P39061 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col18a1P39061 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col18a1P39061 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col18a1P39061 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col18a1P39061 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col18a1P39061 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col18a1P39061 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.26□□□□□ -1.25
Col18a1P39061 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC7.26□□□□□ -1.25
Col18a1P39061 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col18a1P39061 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col18a1P39061 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Col18a1P39061 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Col18a1P39061 Anp32-ps-201ENSMUST00000118265 388 ntBASIC7.26□□□□□ -1.25
Col18a1P39061 Gm11227-201ENSMUST00000119774 471 ntBASIC7.26□□□□□ -1.25
Col18a1P39061 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col18a1P39061 Gm13000-201ENSMUST00000120937 496 ntBASIC7.26□□□□□ -1.25
Col18a1P39061 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col18a1P39061 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC7.26□□□□□ -1.25
Col18a1P39061 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC7.26□□□□□ -1.25
Col18a1P39061 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Col18a1P39061 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col18a1P39061 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC7.26□□□□□ -1.25
Col18a1P39061 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC7.26□□□□□ -1.25
Col18a1P39061 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC7.26□□□□□ -1.25
Col18a1P39061 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col18a1P39061 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col18a1P39061 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC7.26□□□□□ -1.25
Col18a1P39061 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Col18a1P39061 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col18a1P39061 Gm43528-201ENSMUST00000199492 1674 ntBASIC7.26□□□□□ -1.25
Col18a1P39061 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col18a1P39061 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC7.26□□□□□ -1.25
Col18a1P39061 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.26□□□□□ -1.25
Col18a1P39061 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
Col18a1P39061 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col18a1P39061 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col18a1P39061 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col18a1P39061 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col18a1P39061 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Col18a1P39061 Gm38026-201ENSMUST00000193284 3880 ntBASIC7.26□□□□□ -1.25
Col18a1P39061 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col18a1P39061 Defa-ps11-201ENSMUST00000119719 299 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm19224-201ENSMUST00000190477 793 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col18a1P39061 Gm28927-201ENSMUST00000191528 272 ntBASIC7.25□□□□□ -1.25
Col18a1P39061 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms