Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm23250-201ENSMUST00000157444 267 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 Gm23149-201ENSMUST00000158837 230 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 Gm24081-201ENSMUST00000175177 125 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 Mir5125-201ENSMUST00000175240 79 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm27820-201ENSMUST00000183628 175 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm44053-201ENSMUST00000203364 929 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 Api5-ps-201ENSMUST00000206607 577 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm46192-201ENSMUST00000217894 326 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm9269-201ENSMUST00000221661 578 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 AC164597.1-201ENSMUST00000226538 514 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm7919-201ENSMUST00000202043 1389 ntBASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdx1P18111 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Cdx1P18111 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Cdx1P18111 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Cdx1P18111 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm18880-201ENSMUST00000223333 1541 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Cdx1P18111 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Cdx1P18111 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Cdx1P18111 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.36□□□□□ -1.71
Cdx1P18111 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm38085-201ENSMUST00000195785 3062 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm11984-201ENSMUST00000118142 766 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Gm11742-201ENSMUST00000119903 233 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdx1P18111 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Klra13-ps-201ENSMUST00000125813 802 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC4.36□□□□□ -1.71
Cdx1P18111 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm23171-201ENSMUST00000157159 264 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Gm24664-201ENSMUST00000158939 100 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm6808-201ENSMUST00000162341 807 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Gm3091-201ENSMUST00000163408 484 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm27409-201ENSMUST00000184727 80 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Gm29668-201ENSMUST00000187802 315 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Gm43946-201ENSMUST00000204058 886 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Gm6261-201ENSMUST00000204707 760 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC4.36□□□□□ -1.71
Cdx1P18111 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm33242-201ENSMUST00000212130 1057 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm5750-201ENSMUST00000218711 801 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm36501-201ENSMUST00000221857 745 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms