Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm14539-201ENSMUST00000117527 174 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm4342-201ENSMUST00000118982 367 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm13503-201ENSMUST00000119017 446 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm9208-201ENSMUST00000120468 948 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm24860-201ENSMUST00000158457 276 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm25906-201ENSMUST00000158489 126 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm10319-202ENSMUST00000159439 846 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm6047-201ENSMUST00000167221 574 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm8358-201ENSMUST00000167222 555 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm27849-201ENSMUST00000183673 125 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm42437-201ENSMUST00000197263 923 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm2623-201ENSMUST00000199229 286 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm42459-201ENSMUST00000199679 742 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 AC129323.1-201ENSMUST00000216733 470 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm18904-201ENSMUST00000218756 329 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 AC192088.3-201ENSMUST00000227858 831 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm9408-201ENSMUST00000197375 1505 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Gm45177-201ENSMUST00000209104 2307 ntBASIC5□□□□□ -1.61
Upk3aQ9JKX8 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Upk3aQ9JKX8 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm22273-201ENSMUST00000104040 132 ntBASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm12731-201ENSMUST00000120932 268 ntBASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm25907-201ENSMUST00000158486 125 ntBASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm6673-201ENSMUST00000166114 700 ntBASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm26238-201ENSMUST00000175538 117 ntBASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm34176-201ENSMUST00000192621 474 ntBASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Gm8288-201ENSMUST00000223406 593 ntBASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upk3aQ9JKX8 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 AC153494.1-201ENSMUST00000218664 3041 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm14876-201ENSMUST00000120795 327 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm11804-201ENSMUST00000121663 468 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm27266-201ENSMUST00000184521 123 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm6137-201ENSMUST00000187552 578 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm37436-201ENSMUST00000193842 1085 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm29813-201ENSMUST00000195856 447 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm44776-201ENSMUST00000207212 381 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm44820-201ENSMUST00000207420 396 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Gm19256-201ENSMUST00000218550 231 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Clec2j-201ENSMUST00000032517 515 ntBASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upk3aQ9JKX8 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms