Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm18904-201ENSMUST00000218756 329 ntBASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rpp40Q8R1F9 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm22273-201ENSMUST00000104040 132 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm15786-201ENSMUST00000121079 450 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm12422-201ENSMUST00000121431 302 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Mir6343-201ENSMUST00000183584 84 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm8581-201ENSMUST00000188636 890 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm37631-201ENSMUST00000192275 364 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm18007-201ENSMUST00000205019 844 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rpp40Q8R1F9 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Gm24235-201ENSMUST00000104319 129 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Gm13077-201ENSMUST00000121941 484 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Gm14363-201ENSMUST00000122304 409 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Gm26350-201ENSMUST00000157531 288 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Gm10319-202ENSMUST00000159439 846 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Gm7335-201ENSMUST00000172475 373 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Gm37720-201ENSMUST00000195497 1241 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 CT030194.2-201ENSMUST00000225752 379 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Gm24706-201ENSMUST00000082806 137 ntBASIC5.66□□□□□ -1.5
Rpp40Q8R1F9 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 128.4 ms