Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Vps53Q8CCB4 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm14579-201ENSMUST00000117068 283 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm13866-201ENSMUST00000118901 968 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm12850-201ENSMUST00000119210 436 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm13473-201ENSMUST00000119289 367 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm26069-201ENSMUST00000157497 277 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm8032-201ENSMUST00000171009 574 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm21241-201ENSMUST00000179551 934 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm21742-201ENSMUST00000189352 548 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm29376-201ENSMUST00000189357 835 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm18969-201ENSMUST00000189423 730 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm20819-201ENSMUST00000191091 925 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm20871-201ENSMUST00000191322 931 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm38040-201ENSMUST00000193505 225 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm4587-201ENSMUST00000209135 637 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm45249-201ENSMUST00000211021 348 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm45405-201ENSMUST00000211544 609 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm7887-201ENSMUST00000056948 537 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm10064-201ENSMUST00000071235 399 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm23927-201ENSMUST00000082466 215 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Vps53Q8CCB4 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.44□□□□□ -1.38
Vps53Q8CCB4 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm6300-201ENSMUST00000192393 1498 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm23750-201ENSMUST00000104222 132 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm24789-201ENSMUST00000104282 131 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm4989-201ENSMUST00000118711 749 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm12005-201ENSMUST00000121451 379 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm13676-201ENSMUST00000122185 591 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm11197-201ENSMUST00000145158 839 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm24940-201ENSMUST00000158326 108 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm6223-201ENSMUST00000178436 871 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm26970-201ENSMUST00000182990 964 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm29596-201ENSMUST00000185710 385 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm29492-201ENSMUST00000187124 457 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm29284-201ENSMUST00000188363 255 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm37581-201ENSMUST00000192371 988 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm18036-201ENSMUST00000195256 272 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm42522-201ENSMUST00000196071 255 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Mir6994-201ENSMUST00000198985 73 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm29781-201ENSMUST00000203862 478 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm34701-202ENSMUST00000204685 360 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm45870-201ENSMUST00000211269 601 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Gm20786-201ENSMUST00000212649 436 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 AC102352.1-201ENSMUST00000224187 582 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.43□□□□□ -1.38
Vps53Q8CCB4 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms