Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm37629-201ENSMUST00000193635 1050 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm43408-201ENSMUST00000198263 440 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm45072-201ENSMUST00000208673 929 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm45660-201ENSMUST00000210267 151 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm9512-201ENSMUST00000223112 497 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm7040-201ENSMUST00000223271 443 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Zfp429-203ENSMUST00000224684 524 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 AC158142.3-201ENSMUST00000226230 675 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm14659-201ENSMUST00000117667 843 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm11313-201ENSMUST00000118779 432 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm16463-201ENSMUST00000120527 721 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm25389-201ENSMUST00000157340 286 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm23700-201ENSMUST00000158842 102 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm27849-201ENSMUST00000183673 125 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm42869-201ENSMUST00000199953 2121 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm43371-201ENSMUST00000202838 1031 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm32453-201ENSMUST00000204183 456 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Gm7439-201ENSMUST00000214053 835 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Olfr151-202ENSMUST00000221099 929 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 AC125484.1-201ENSMUST00000223218 234 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Mir133b-201ENSMUST00000083546 119 ntBASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Atg4aQ8C9S8 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.15□□□□□ -1.43
Atg4aQ8C9S8 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Atg4aQ8C9S8 Gm3978-201ENSMUST00000163406 2512 ntBASIC6.15□□□□□ -1.43
Atg4aQ8C9S8 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Atg4aQ8C9S8 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
Atg4aQ8C9S8 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm45129-201ENSMUST00000208444 2224 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm14791-201ENSMUST00000119061 1166 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm14695-201ENSMUST00000121721 282 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm13487-201ENSMUST00000122240 864 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm17044-201ENSMUST00000168549 828 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm5777-201ENSMUST00000177265 448 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm5334-201ENSMUST00000187472 720 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm37355-201ENSMUST00000193345 606 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm18482-201ENSMUST00000202405 760 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm8999-201ENSMUST00000204951 969 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm44795-201ENSMUST00000205496 319 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm5418-201ENSMUST00000206932 528 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 AC138765.1-201ENSMUST00000228657 385 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Mir188-201ENSMUST00000083464 68 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Mir337-201ENSMUST00000083592 97 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC6.14□□□□□ -1.43
Atg4aQ8C9S8 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms