Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Smarcc1P97496 Gm16523-202ENSMUST00000203640 4750 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm42676-201ENSMUST00000197609 2686 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm1966-201ENSMUST00000184540 7293 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Smarcc1P97496 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smarcc1P97496 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Smarcc1P97496 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smarcc1P97496 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Smarcc1P97496 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm44697-201ENSMUST00000207756 1679 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm14932-201ENSMUST00000117112 453 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm14576-201ENSMUST00000118073 1111 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm14795-201ENSMUST00000118461 471 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm13359-201ENSMUST00000119000 695 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm25179-201ENSMUST00000122632 128 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC7.17□□□□□ -1.26
Smarcc1P97496 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm16558-201ENSMUST00000163015 532 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smarcc1P97496 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Smarcc1P97496 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm45070-201ENSMUST00000208100 246 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm8291-201ENSMUST00000209635 1261 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Smarcc1P97496 CT030182.2-201ENSMUST00000223569 620 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 AC117656.3-205ENSMUST00000224606 1205 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 AC091783.2-201ENSMUST00000224626 740 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 AC160980.2-201ENSMUST00000225131 949 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 AC154626.1-201ENSMUST00000226070 311 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
Smarcc1P97496 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smarcc1P97496 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
Smarcc1P97496 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm9386-201ENSMUST00000095195 381 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 AC134860.3-201ENSMUST00000223564 1300 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm20789-201ENSMUST00000221002 4195 ntBASIC7.17□□□□□ -1.26
Smarcc1P97496 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smarcc1P97496 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smarcc1P97496 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Smarcc1P97496 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC7.17□□□□□ -1.26
Smarcc1P97496 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smarcc1P97496 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm14382-201ENSMUST00000117374 437 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm13469-201ENSMUST00000118231 350 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm24840-201ENSMUST00000122603 147 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm15878-201ENSMUST00000127561 306 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm29525-201ENSMUST00000189844 699 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm29523-201ENSMUST00000191415 699 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm45082-201ENSMUST00000206082 601 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm4574-201ENSMUST00000207804 542 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm7990-201ENSMUST00000212126 593 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm8290-201ENSMUST00000218202 477 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 AC153943.1-201ENSMUST00000219312 256 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 AC116589.4-201ENSMUST00000222390 216 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 AC238676.3-201ENSMUST00000223042 154 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 AC124549.1-201ENSMUST00000225912 333 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Mir27a-201ENSMUST00000083510 87 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm38387-201ENSMUST00000191945 2577 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Smarcc1P97496 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Smarcc1P97496 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Smarcc1P97496 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7.16□□□□□ -1.26
Smarcc1P97496 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Smarcc1P97496 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Smarcc1P97496 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms